Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 KRT19P1-201ENST00000405746 1186 ntBASIC17.52■□□□□ 0.4
ZNF48Q96MX3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 BID-214ENST00000617586 542 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.52■□□□□ 0.4
ZNF48Q96MX3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF48Q96MX3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF48Q96MX3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.51■□□□□ 0.39
ZNF48Q96MX3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF48Q96MX3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 AC079140.4-201ENST00000507448 529 ntBASIC17.5■□□□□ 0.39
ZNF48Q96MX3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ZNF48Q96MX3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 AC026185.1-201ENST00000445748 174 ntBASIC17.49■□□□□ 0.39
ZNF48Q96MX3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF48Q96MX3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 ESRRAP2-201ENST00000418437 1549 ntBASIC17.48■□□□□ 0.39
ZNF48Q96MX3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZNF48Q96MX3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 C9orf163-202ENST00000624034 2573 ntBASIC17.47■□□□□ 0.39
ZNF48Q96MX3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.47■□□□□ 0.39
ZNF48Q96MX3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF48Q96MX3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF48Q96MX3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms