Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 AC006058.3-201ENST00000606217 1069 ntBASIC18.38■□□□□ 0.53
SPG11Q96JI7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 DUSP8P5-201ENST00000422884 1815 ntBASIC18.38■□□□□ 0.53
SPG11Q96JI7 AC004812.2-201ENST00000611079 2094 ntBASIC18.38■□□□□ 0.53
SPG11Q96JI7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPG11Q96JI7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 AL158047.1-201ENST00000445918 881 ntBASIC18.38■□□□□ 0.53
SPG11Q96JI7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
SPG11Q96JI7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPG11Q96JI7 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPG11Q96JI7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPG11Q96JI7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPG11Q96JI7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPG11Q96JI7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 OXCT2P1-201ENST00000447263 1535 ntBASIC18.37■□□□□ 0.53
SPG11Q96JI7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPG11Q96JI7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 AC010141.2-201ENST00000452426 721 ntBASIC18.37■□□□□ 0.53
SPG11Q96JI7 AC128676.1-201ENST00000454392 318 ntBASIC18.37■□□□□ 0.53
SPG11Q96JI7 AC016405.3-201ENST00000607710 860 ntBASIC18.37■□□□□ 0.53
SPG11Q96JI7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.37■□□□□ 0.53
SPG11Q96JI7 AP006294.2-201ENST00000641667 209 ntBASIC18.37■□□□□ 0.53
SPG11Q96JI7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.36■□□□□ 0.53
SPG11Q96JI7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.36■□□□□ 0.53
SPG11Q96JI7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPG11Q96JI7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 UNC93B5-201ENST00000530315 699 ntBASIC18.35■□□□□ 0.53
SPG11Q96JI7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 RPS2P4-201ENST00000476944 856 ntBASIC18.35■□□□□ 0.53
SPG11Q96JI7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPG11Q96JI7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPG11Q96JI7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPG11Q96JI7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.34■□□□□ 0.53
SPG11Q96JI7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPG11Q96JI7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPG11Q96JI7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPG11Q96JI7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPG11Q96JI7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.34■□□□□ 0.53
SPG11Q96JI7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.34■□□□□ 0.53
SPG11Q96JI7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.34■□□□□ 0.53
SPG11Q96JI7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPG11Q96JI7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.34■□□□□ 0.53
SPG11Q96JI7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SPG11Q96JI7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPG11Q96JI7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPG11Q96JI7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms