Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRRC46Q96FV0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 AC010141.3-201ENST00000456659 717 ntBASIC19.29■□□□□ 0.68
LRRC46Q96FV0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 AC137761.2-201ENST00000561729 223 ntBASIC19.29■□□□□ 0.68
LRRC46Q96FV0 AC145350.3-201ENST00000569033 163 ntBASIC19.29■□□□□ 0.68
LRRC46Q96FV0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC46Q96FV0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 C1orf229-201ENST00000623686 2258 ntBASIC19.28■□□□□ 0.68
LRRC46Q96FV0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 BX005040.4-201ENST00000637145 1518 ntBASIC19.28■□□□□ 0.68
LRRC46Q96FV0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC46Q96FV0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 ID1-201ENST00000376105 1233 ntBASIC19.27■□□□□ 0.68
LRRC46Q96FV0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC46Q96FV0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.27■□□□□ 0.68
LRRC46Q96FV0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC46Q96FV0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC46Q96FV0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 AC004687.1-201ENST00000579003 1625 ntBASIC19.26■□□□□ 0.67
LRRC46Q96FV0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 KRT19P1-201ENST00000405746 1186 ntBASIC19.26■□□□□ 0.67
LRRC46Q96FV0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC46Q96FV0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC46Q96FV0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC46Q96FV0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC46Q96FV0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRRC46Q96FV0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms