Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB1Q8WWH5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB1Q8WWH5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 MIR6722-201ENST00000617286 78 ntBASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB1Q8WWH5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB1Q8WWH5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 Z98882.1-201ENST00000622160 2253 ntBASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB1Q8WWH5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.64■□□□□ 0.74
TRUB1Q8WWH5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TRUB1Q8WWH5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TRUB1Q8WWH5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB1Q8WWH5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB1Q8WWH5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRUB1Q8WWH5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRUB1Q8WWH5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 MIR4508-201ENST00000584178 70 ntBASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRUB1Q8WWH5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRUB1Q8WWH5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms