Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TMEM191A-211ENST00000637163 1067 ntBASIC16.87■□□□□ 0.29
LINC01006Q8NI28 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01006Q8NI28 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 AC010141.2-201ENST00000452426 721 ntBASIC16.86■□□□□ 0.29
LINC01006Q8NI28 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01006Q8NI28 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 OR7E47P-201ENST00000546390 1422 ntBASIC16.85■□□□□ 0.29
LINC01006Q8NI28 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01006Q8NI28 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 CNN2P6-201ENST00000439038 900 ntBASIC16.84■□□□□ 0.29
LINC01006Q8NI28 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 KRT18P6-201ENST00000555540 1265 ntBASIC16.84■□□□□ 0.29
LINC01006Q8NI28 AL138781.1-201ENST00000566567 1274 ntBASIC16.84■□□□□ 0.29
LINC01006Q8NI28 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 AC010536.3-201ENST00000620306 533 ntBASIC16.84■□□□□ 0.29
LINC01006Q8NI28 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01006Q8NI28 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
LINC01006Q8NI28 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 AF201337.1-201ENST00000520239 748 ntBASIC16.83■□□□□ 0.28
LINC01006Q8NI28 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LINC01006Q8NI28 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 TSPY20P-201ENST00000450910 630 ntBASIC16.82■□□□□ 0.28
LINC01006Q8NI28 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 AL034346.1-201ENST00000568244 1277 ntBASIC16.82■□□□□ 0.28
LINC01006Q8NI28 AC133552.2-202ENST00000575694 574 ntBASIC16.82■□□□□ 0.28
LINC01006Q8NI28 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01006Q8NI28 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms