Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LPCAT1Q8NF37 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 AC092053.2-201ENST00000640557 1818 ntBASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LPCAT1Q8NF37 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 AL354811.1-201ENST00000610286 706 ntBASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.71■■□□□ 1.07
LPCAT1Q8NF37 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LPCAT1Q8NF37 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LPCAT1Q8NF37 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LPCAT1Q8NF37 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 AP004607.7-201ENST00000527152 1677 ntBASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 AL358852.1-201ENST00000623174 1268 ntBASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LPCAT1Q8NF37 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LPCAT1Q8NF37 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LPCAT1Q8NF37 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LPCAT1Q8NF37 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms