Protein–RNA interactions for Protein: Q8NEM0

MCPH1, Microcephalin, humanhuman

Predictions only

Length 835 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1Q8NEM0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MCPH1Q8NEM0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.8■■□□□ 1.4
MCPH1Q8NEM0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 AL162430.1-201ENST00000480705 870 ntBASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 AC233723.2-201ENST00000623798 2106 ntBASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.79■■□□□ 1.4
MCPH1Q8NEM0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 AC055733.4-201ENST00000638462 1354 ntBASIC23.78■■□□□ 1.4
MCPH1Q8NEM0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MCPH1Q8NEM0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MCPH1Q8NEM0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MCPH1Q8NEM0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
MCPH1Q8NEM0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MCPH1Q8NEM0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 AC242852.2-201ENST00000615738 1807 ntBASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 AC012676.1-201ENST00000574705 1949 ntBASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.76■■□□□ 1.39
MCPH1Q8NEM0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 AC092053.2-201ENST00000640557 1818 ntBASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 AC079140.4-201ENST00000507448 529 ntBASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MCPH1Q8NEM0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 AP006587.3-201ENST00000525742 1516 ntBASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 GUSBP5-202ENST00000510805 1989 ntBASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
MCPH1Q8NEM0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms