Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.59■□□□□ 0.41
LRTM2Q8N967 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
LRTM2Q8N967 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRTM2Q8N967 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRTM2Q8N967 FEM1AP1-201ENST00000431297 1995 ntBASIC17.59■□□□□ 0.41
LRTM2Q8N967 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LRTM2Q8N967 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRTM2Q8N967 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
LRTM2Q8N967 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LRTM2Q8N967 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRTM2Q8N967 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRTM2Q8N967 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRTM2Q8N967 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRTM2Q8N967 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRTM2Q8N967 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRTM2Q8N967 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.58■□□□□ 0.4
LRTM2Q8N967 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LRTM2Q8N967 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRTM2Q8N967 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRTM2Q8N967 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRTM2Q8N967 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.58■□□□□ 0.4
LRTM2Q8N967 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.58■□□□□ 0.4
LRTM2Q8N967 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.58■□□□□ 0.4
LRTM2Q8N967 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM2Q8N967 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM2Q8N967 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 AC026471.6-201ENST00000622954 1905 ntBASIC17.57■□□□□ 0.4
LRTM2Q8N967 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM2Q8N967 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 MIR4508-201ENST00000584178 70 ntBASIC17.57■□□□□ 0.4
LRTM2Q8N967 AC137630.3-201ENST00000607245 391 ntBASIC17.57■□□□□ 0.4
LRTM2Q8N967 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRTM2Q8N967 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.57■□□□□ 0.4
LRTM2Q8N967 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.56■□□□□ 0.4
LRTM2Q8N967 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.56■□□□□ 0.4
LRTM2Q8N967 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.56■□□□□ 0.4
LRTM2Q8N967 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 AC079089.2-201ENST00000531211 1277 ntBASIC17.56■□□□□ 0.4
LRTM2Q8N967 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRTM2Q8N967 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.56■□□□□ 0.4
LRTM2Q8N967 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRTM2Q8N967 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM2Q8N967 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.55■□□□□ 0.4
LRTM2Q8N967 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
LRTM2Q8N967 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRTM2Q8N967 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.54■□□□□ 0.4
LRTM2Q8N967 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.54■□□□□ 0.4
LRTM2Q8N967 AL499627.2-201ENST00000606283 725 ntBASIC17.54■□□□□ 0.4
LRTM2Q8N967 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 AC009102.2-201ENST00000606772 1639 ntBASIC17.54■□□□□ 0.4
LRTM2Q8N967 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM2Q8N967 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms