Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN22Q8N7P3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN22Q8N7P3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN22Q8N7P3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.58■□□□□ 0.73
CLDN22Q8N7P3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CLDN22Q8N7P3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 AC079089.2-201ENST00000531211 1277 ntBASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 AC099791.2-201ENST00000605725 427 ntBASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN22Q8N7P3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLDN22Q8N7P3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CLDN22Q8N7P3 Z98882.1-201ENST00000622160 2253 ntBASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 AL512631.2-201ENST00000604634 923 ntBASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN22Q8N7P3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN22Q8N7P3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms