Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.32■■□□□ 1.32
VPS52Q8N1B4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS52Q8N1B4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS52Q8N1B4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 AC079140.4-201ENST00000507448 529 ntBASIC23.29■■□□□ 1.32
VPS52Q8N1B4 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.29■■□□□ 1.32
VPS52Q8N1B4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS52Q8N1B4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 ANOS2P-203ENST00000472227 1816 ntBASIC23.28■■□□□ 1.32
VPS52Q8N1B4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
VPS52Q8N1B4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 ESRRAP2-201ENST00000418437 1549 ntBASIC23.27■■□□□ 1.32
VPS52Q8N1B4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS52Q8N1B4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VPS52Q8N1B4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 KRT18P11-201ENST00000435214 1283 ntBASIC23.25■■□□□ 1.31
VPS52Q8N1B4 CROCCP5-201ENST00000436658 830 ntBASIC23.25■■□□□ 1.31
VPS52Q8N1B4 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.25■■□□□ 1.31
VPS52Q8N1B4 AC006970.2-201ENST00000450065 779 ntBASIC23.25■■□□□ 1.31
VPS52Q8N1B4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 AC011767.1-201ENST00000617410 1153 ntBASIC23.25■■□□□ 1.31
VPS52Q8N1B4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS52Q8N1B4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 AC104771.1-201ENST00000603335 964 ntBASIC23.24■■□□□ 1.31
VPS52Q8N1B4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
VPS52Q8N1B4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms