Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.11■■□□□ 1.13
SIX5Q8N196 SLC7A5P1-201ENST00000568957 537 ntBASIC22.11■■□□□ 1.13
SIX5Q8N196 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIX5Q8N196 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.11■■□□□ 1.13
SIX5Q8N196 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.11■■□□□ 1.13
SIX5Q8N196 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIX5Q8N196 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIX5Q8N196 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIX5Q8N196 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIX5Q8N196 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
SIX5Q8N196 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIX5Q8N196 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.1■■□□□ 1.13
SIX5Q8N196 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.1■■□□□ 1.13
SIX5Q8N196 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SIX5Q8N196 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.1■■□□□ 1.13
SIX5Q8N196 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.1■■□□□ 1.13
SIX5Q8N196 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIX5Q8N196 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.1■■□□□ 1.13
SIX5Q8N196 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIX5Q8N196 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SIX5Q8N196 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SIX5Q8N196 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SIX5Q8N196 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SIX5Q8N196 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SIX5Q8N196 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.09■■□□□ 1.13
SIX5Q8N196 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.09■■□□□ 1.13
SIX5Q8N196 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.09■■□□□ 1.13
SIX5Q8N196 RARRES2P4-201ENST00000514074 484 ntBASIC22.09■■□□□ 1.13
SIX5Q8N196 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
SIX5Q8N196 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SIX5Q8N196 AC013268.1-206ENST00000638368 961 ntBASIC22.09■■□□□ 1.13
SIX5Q8N196 AC112229.1-201ENST00000639295 961 ntBASIC22.09■■□□□ 1.13
SIX5Q8N196 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SIX5Q8N196 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.09■■□□□ 1.13
SIX5Q8N196 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SIX5Q8N196 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.08■■□□□ 1.13
SIX5Q8N196 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
SIX5Q8N196 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SIX5Q8N196 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SIX5Q8N196 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.08■■□□□ 1.13
SIX5Q8N196 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SIX5Q8N196 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.08■■□□□ 1.13
SIX5Q8N196 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SIX5Q8N196 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SIX5Q8N196 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.07■■□□□ 1.12
SIX5Q8N196 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.07■■□□□ 1.12
SIX5Q8N196 CYP2T1P-201ENST00000432607 1285 ntBASIC22.07■■□□□ 1.12
SIX5Q8N196 AC010141.2-201ENST00000452426 721 ntBASIC22.07■■□□□ 1.12
SIX5Q8N196 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.07■■□□□ 1.12
SIX5Q8N196 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.07■■□□□ 1.12
SIX5Q8N196 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.07■■□□□ 1.12
SIX5Q8N196 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.07■■□□□ 1.12
SIX5Q8N196 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.07■■□□□ 1.12
SIX5Q8N196 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SIX5Q8N196 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SIX5Q8N196 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SIX5Q8N196 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SIX5Q8N196 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.06■■□□□ 1.12
SIX5Q8N196 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SIX5Q8N196 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.06■■□□□ 1.12
SIX5Q8N196 KRT18P20-201ENST00000548986 1279 ntBASIC22.06■■□□□ 1.12
SIX5Q8N196 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SIX5Q8N196 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SIX5Q8N196 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SIX5Q8N196 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.05■■□□□ 1.12
SIX5Q8N196 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SIX5Q8N196 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SIX5Q8N196 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
SIX5Q8N196 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.05■■□□□ 1.12
SIX5Q8N196 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.05■■□□□ 1.12
SIX5Q8N196 GCSHP5-201ENST00000443090 522 ntBASIC22.05■■□□□ 1.12
SIX5Q8N196 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.05■■□□□ 1.12
SIX5Q8N196 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
SIX5Q8N196 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SIX5Q8N196 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.05■■□□□ 1.12
SIX5Q8N196 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.05■■□□□ 1.12
SIX5Q8N196 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SIX5Q8N196 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SIX5Q8N196 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SIX5Q8N196 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.04■■□□□ 1.12
SIX5Q8N196 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SIX5Q8N196 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.04■■□□□ 1.12
SIX5Q8N196 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SIX5Q8N196 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.04■■□□□ 1.12
SIX5Q8N196 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.04■■□□□ 1.12
SIX5Q8N196 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SIX5Q8N196 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIX5Q8N196 AC068338.2-201ENST00000563278 1430 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms