Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP004607.7-201ENST00000527152 1677 ntBASIC20.58■□□□□ 0.88
COL27A1Q8IZC6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 AC068338.2-201ENST00000563278 1430 ntBASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 ANOS2P-203ENST00000472227 1816 ntBASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 AP006587.3-201ENST00000525742 1516 ntBASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL27A1Q8IZC6 AC007322.4-201ENST00000509611 723 ntBASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL27A1Q8IZC6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 LINC00526-201ENST00000581067 1875 ntBASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COL27A1Q8IZC6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL27A1Q8IZC6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 AL034346.1-201ENST00000568244 1277 ntBASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL27A1Q8IZC6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.52■□□□□ 0.88
COL27A1Q8IZC6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.52■□□□□ 0.88
COL27A1Q8IZC6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL27A1Q8IZC6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.52■□□□□ 0.88
COL27A1Q8IZC6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL27A1Q8IZC6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL27A1Q8IZC6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 AC083880.1-201ENST00000608266 535 ntBASIC20.52■□□□□ 0.87
COL27A1Q8IZC6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL27A1Q8IZC6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL27A1Q8IZC6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms