Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC28Q86X40 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LRRC28Q86X40 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC28Q86X40 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC28Q86X40 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRC28Q86X40 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRC28Q86X40 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC28Q86X40 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRRC28Q86X40 AL136116.3-201ENST00000402907 1138 ntBASIC19.08■□□□□ 0.64
LRRC28Q86X40 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.08■□□□□ 0.64
LRRC28Q86X40 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRRC28Q86X40 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC28Q86X40 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC28Q86X40 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC28Q86X40 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC28Q86X40 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC28Q86X40 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC28Q86X40 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LRRC28Q86X40 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRRC28Q86X40 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
LRRC28Q86X40 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC28Q86X40 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC28Q86X40 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC28Q86X40 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC28Q86X40 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC28Q86X40 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC28Q86X40 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC28Q86X40 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRRC28Q86X40 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
LRRC28Q86X40 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC28Q86X40 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC28Q86X40 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRRC28Q86X40 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRRC28Q86X40 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC28Q86X40 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC28Q86X40 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC28Q86X40 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC28Q86X40 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRRC28Q86X40 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC28Q86X40 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC28Q86X40 LINC01521-201ENST00000504184 1943 ntBASIC19.04■□□□□ 0.64
LRRC28Q86X40 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC28Q86X40 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC28Q86X40 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC28Q86X40 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LRRC28Q86X40 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC28Q86X40 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC28Q86X40 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC28Q86X40 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRC28Q86X40 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.02■□□□□ 0.64
LRRC28Q86X40 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRC28Q86X40 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRRC28Q86X40 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRC28Q86X40 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRC28Q86X40 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms