Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PACS2Q86VP3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS2Q86VP3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS2Q86VP3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS2Q86VP3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 THA1P-201ENST00000590384 1145 ntBASIC21.56■■□□□ 1.04
PACS2Q86VP3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PACS2Q86VP3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.56■■□□□ 1.04
PACS2Q86VP3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS2Q86VP3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.55■■□□□ 1.04
PACS2Q86VP3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.55■■□□□ 1.04
PACS2Q86VP3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.55■■□□□ 1.04
PACS2Q86VP3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS2Q86VP3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.55■■□□□ 1.04
PACS2Q86VP3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
PACS2Q86VP3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PACS2Q86VP3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PACS2Q86VP3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PACS2Q86VP3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PACS2Q86VP3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.54■■□□□ 1.04
PACS2Q86VP3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.54■■□□□ 1.04
PACS2Q86VP3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PACS2Q86VP3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PACS2Q86VP3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.54■■□□□ 1.04
PACS2Q86VP3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.54■■□□□ 1.04
PACS2Q86VP3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PACS2Q86VP3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.53■■□□□ 1.04
PACS2Q86VP3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.53■■□□□ 1.04
PACS2Q86VP3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.53■■□□□ 1.04
PACS2Q86VP3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.53■■□□□ 1.04
PACS2Q86VP3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS2Q86VP3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PACS2Q86VP3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PACS2Q86VP3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS2Q86VP3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS2Q86VP3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS2Q86VP3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS2Q86VP3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS2Q86VP3 AC009299.2-201ENST00000482477 511 ntBASIC21.52■■□□□ 1.04
PACS2Q86VP3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS2Q86VP3 AC120024.1-201ENST00000562672 995 ntBASIC21.52■■□□□ 1.04
PACS2Q86VP3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PACS2Q86VP3 AL035685.1-201ENST00000636663 812 ntBASIC21.52■■□□□ 1.04
PACS2Q86VP3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PACS2Q86VP3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PACS2Q86VP3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PACS2Q86VP3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
PACS2Q86VP3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PACS2Q86VP3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS2Q86VP3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PACS2Q86VP3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS2Q86VP3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PACS2Q86VP3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS2Q86VP3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS2Q86VP3 AC011551.1-201ENST00000614101 683 ntBASIC21.51■■□□□ 1.03
PACS2Q86VP3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS2Q86VP3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PACS2Q86VP3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PACS2Q86VP3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.5■■□□□ 1.03
PACS2Q86VP3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.5■■□□□ 1.03
PACS2Q86VP3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.5■■□□□ 1.03
PACS2Q86VP3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.5■■□□□ 1.03
PACS2Q86VP3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
PACS2Q86VP3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PACS2Q86VP3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PACS2Q86VP3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PACS2Q86VP3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.49■■□□□ 1.03
PACS2Q86VP3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS2Q86VP3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PACS2Q86VP3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS2Q86VP3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS2Q86VP3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PACS2Q86VP3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PACS2Q86VP3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.49■■□□□ 1.03
PACS2Q86VP3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms