Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AC008687.6-201ENST00000596318 630 ntBASIC24.06■■□□□ 1.44
RNF180Q86T96 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
RNF180Q86T96 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF180Q86T96 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF180Q86T96 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF180Q86T96 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF180Q86T96 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF180Q86T96 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF180Q86T96 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF180Q86T96 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.05■■□□□ 1.44
RNF180Q86T96 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.05■■□□□ 1.44
RNF180Q86T96 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
RNF180Q86T96 ITM2C-210ENST00000620962 501 ntBASIC24.05■■□□□ 1.44
RNF180Q86T96 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF180Q86T96 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF180Q86T96 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF180Q86T96 AC020928.2-201ENST00000588717 2197 ntBASIC24.05■■□□□ 1.44
RNF180Q86T96 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF180Q86T96 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF180Q86T96 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF180Q86T96 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.04■■□□□ 1.44
RNF180Q86T96 KRT18P29-201ENST00000397031 1267 ntBASIC24.04■■□□□ 1.44
RNF180Q86T96 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.04■■□□□ 1.44
RNF180Q86T96 RNA5SP413-201ENST00000516373 109 ntBASIC24.04■■□□□ 1.44
RNF180Q86T96 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF180Q86T96 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.04■■□□□ 1.44
RNF180Q86T96 AP004607.7-201ENST00000527152 1677 ntBASIC24.04■■□□□ 1.44
RNF180Q86T96 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
RNF180Q86T96 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.04■■□□□ 1.44
RNF180Q86T96 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF180Q86T96 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RNF180Q86T96 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF180Q86T96 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF180Q86T96 MIPEPP3-201ENST00000412105 444 ntBASIC24.03■■□□□ 1.44
RNF180Q86T96 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.03■■□□□ 1.44
RNF180Q86T96 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF180Q86T96 MKRN4P-201ENST00000444706 1521 ntBASIC24.03■■□□□ 1.44
RNF180Q86T96 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF180Q86T96 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF180Q86T96 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF180Q86T96 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF180Q86T96 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF180Q86T96 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF180Q86T96 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF180Q86T96 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF180Q86T96 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF180Q86T96 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 AC068338.2-201ENST00000563278 1430 ntBASIC24.01■■□□□ 1.43
RNF180Q86T96 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.01■■□□□ 1.43
RNF180Q86T96 CYP2T1P-201ENST00000432607 1285 ntBASIC24.01■■□□□ 1.43
RNF180Q86T96 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
RNF180Q86T96 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF180Q86T96 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF180Q86T96 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RNF180Q86T96 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF180Q86T96 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24■■□□□ 1.43
RNF180Q86T96 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24■■□□□ 1.43
RNF180Q86T96 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24■■□□□ 1.43
RNF180Q86T96 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24■■□□□ 1.43
RNF180Q86T96 OR10C1-204ENST00000622521 1039 ntBASIC24■■□□□ 1.43
RNF180Q86T96 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RNF180Q86T96 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RNF180Q86T96 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
RNF180Q86T96 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RNF180Q86T96 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF180Q86T96 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF180Q86T96 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF180Q86T96 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF180Q86T96 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RNF180Q86T96 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF180Q86T96 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.99■■□□□ 1.43
RNF180Q86T96 AC007322.4-201ENST00000509611 723 ntBASIC23.99■■□□□ 1.43
RNF180Q86T96 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF180Q86T96 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.99■■□□□ 1.43
RNF180Q86T96 AC008694.1-202ENST00000636953 945 ntBASIC23.99■■□□□ 1.43
RNF180Q86T96 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF180Q86T96 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RNF180Q86T96 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF180Q86T96 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF180Q86T96 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF180Q86T96 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF180Q86T96 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.98■■□□□ 1.43
RNF180Q86T96 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF180Q86T96 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF180Q86T96 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF180Q86T96 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF180Q86T96 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms