Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
LYSMD3Q7Z3D4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
LYSMD3Q7Z3D4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LYSMD3Q7Z3D4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 AC012414.1-201ENST00000556676 535 ntBASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
LYSMD3Q7Z3D4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 ECEL1P1-201ENST00000373592 1742 ntBASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 MIR6084-201ENST00000622012 110 ntBASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LYSMD3Q7Z3D4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 AL024507.2-201ENST00000606070 2574 ntBASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD3Q7Z3D4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 AL354811.1-201ENST00000610286 706 ntBASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 AL358852.1-201ENST00000623174 1268 ntBASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD3Q7Z3D4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 EP400NL-214ENST00000641289 2402 ntBASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 LINC00565-201ENST00000562710 2331 ntBASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD3Q7Z3D4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.59■■□□□ 1.05
LYSMD3Q7Z3D4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms