Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 MIR4466-201ENST00000606121 54 ntBASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 AL138724.1-201ENST00000606771 1088 ntBASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 AL031602.1-201ENST00000633169 911 ntBASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST3H2AQ7L7L0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST3H2AQ7L7L0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 OR2I1P-207ENST00000453522 948 ntBASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST3H2AQ7L7L0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 AC079089.2-201ENST00000531211 1277 ntBASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST3H2AQ7L7L0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 AC131281.2-201ENST00000520478 145 ntBASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST3H2AQ7L7L0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 SERBP1P1-201ENST00000396021 1160 ntBASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.55■□□□□ 0.72
HIST3H2AQ7L7L0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST3H2AQ7L7L0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms