Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PPP4R3AQ6IN85 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.48■■□□□ 1.51
PPP4R3AQ6IN85 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 BX005040.4-201ENST00000637145 1518 ntBASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PPP4R3AQ6IN85 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 AC027612.3-201ENST00000413684 1047 ntBASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 AC092053.2-201ENST00000640557 1818 ntBASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PPP4R3AQ6IN85 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 AL034346.1-201ENST00000568244 1277 ntBASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PPP4R3AQ6IN85 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 MIR6084-201ENST00000622012 110 ntBASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3AQ6IN85 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 AP004607.7-201ENST00000527152 1677 ntBASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3AQ6IN85 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3AQ6IN85 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R3AQ6IN85 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms