Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-BQ31612 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-BQ31612 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-BQ31612 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-BQ31612 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-BQ31612 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-BQ31612 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.08■□□□□ 0.97
HLA-BQ31612 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HLA-BQ31612 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-BQ31612 AP004607.7-201ENST00000527152 1677 ntBASIC21.08■□□□□ 0.96
HLA-BQ31612 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-BQ31612 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-BQ31612 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-BQ31612 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-BQ31612 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.07■□□□□ 0.96
HLA-BQ31612 AC098934.4-201ENST00000564127 592 ntBASIC21.07■□□□□ 0.96
HLA-BQ31612 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-BQ31612 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-BQ31612 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-BQ31612 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
HLA-BQ31612 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-BQ31612 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-BQ31612 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HLA-BQ31612 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.06■□□□□ 0.96
HLA-BQ31612 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.06■□□□□ 0.96
HLA-BQ31612 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-BQ31612 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HLA-BQ31612 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HLA-BQ31612 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-BQ31612 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-BQ31612 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-BQ31612 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.05■□□□□ 0.96
HLA-BQ31612 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-BQ31612 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-BQ31612 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-BQ31612 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-BQ31612 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-BQ31612 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-BQ31612 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HLA-BQ31612 AC013268.1-206ENST00000638368 961 ntBASIC21.04■□□□□ 0.96
HLA-BQ31612 AC112229.1-201ENST00000639295 961 ntBASIC21.04■□□□□ 0.96
HLA-BQ31612 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HLA-BQ31612 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-BQ31612 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-BQ31612 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-BQ31612 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-BQ31612 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-BQ31612 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HLA-BQ31612 LINC01960-201ENST00000563759 1884 ntBASIC21.03■□□□□ 0.96
HLA-BQ31612 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
HLA-BQ31612 TERF1P5-201ENST00000477545 1207 ntBASIC21.03■□□□□ 0.96
HLA-BQ31612 MIR4758-201ENST00000577688 71 ntBASIC21.03■□□□□ 0.96
HLA-BQ31612 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.03■□□□□ 0.96
HLA-BQ31612 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-BQ31612 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-BQ31612 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-BQ31612 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
HLA-BQ31612 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.02■□□□□ 0.96
HLA-BQ31612 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-BQ31612 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-BQ31612 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-BQ31612 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-BQ31612 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HLA-BQ31612 ANOS2P-203ENST00000472227 1816 ntBASIC21.01■□□□□ 0.95
HLA-BQ31612 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.01■□□□□ 0.95
HLA-BQ31612 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.01■□□□□ 0.95
HLA-BQ31612 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-BQ31612 SLC7A5P1-201ENST00000568957 537 ntBASIC21.01■□□□□ 0.95
HLA-BQ31612 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.01■□□□□ 0.95
HLA-BQ31612 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-BQ31612 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-BQ31612 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-BQ31612 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-BQ31612 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21■□□□□ 0.95
HLA-BQ31612 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21■□□□□ 0.95
HLA-BQ31612 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21■□□□□ 0.95
HLA-BQ31612 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21■□□□□ 0.95
HLA-BQ31612 AC068338.2-201ENST00000563278 1430 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms