Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 SAE3YHR079C-A 276 nt4.79□□□□□ -1.64
NPL3Q01560 YKE4YIL023C 1041 nt4.79□□□□□ -1.64
NPL3Q01560 BET4YJL031C 984 nt4.79□□□□□ -1.64
NPL3Q01560 YPR170W-AYPR170W-A 186 nt4.79□□□□□ -1.64
NPL3Q01560 TRS20YBR254C 528 nt4.79□□□□□ -1.64 RIP-Chip
NPL3Q01560 NOP8YOL144W 1455 nt4.79□□□□□ -1.64
NPL3Q01560 DNF2YDR093W 4839 nt4.79□□□□□ -1.64
NPL3Q01560 SYF1YDR416W 2580 nt4.79□□□□□ -1.64
NPL3Q01560 SEC9YGR009C 1956 nt4.78□□□□□ -1.64
NPL3Q01560 UPF3YGR072W 1164 nt4.78□□□□□ -1.64
NPL3Q01560 TRX2YGR209C 315 nt4.78□□□□□ -1.64
NPL3Q01560 PRS3YHL011C 963 nt4.78□□□□□ -1.64
NPL3Q01560 SYS1YJL004C 612 nt4.78□□□□□ -1.64
NPL3Q01560 RPN13YLR421C 471 nt4.78□□□□□ -1.64
NPL3Q01560 YOR105WYOR105W 327 nt4.78□□□□□ -1.64
NPL3Q01560 YPR012WYPR012W 255 nt4.78□□□□□ -1.64
NPL3Q01560 PRP43YGL120C 2304 nt4.78□□□□□ -1.64
NPL3Q01560 BCS1YDR375C 1371 nt4.78□□□□□ -1.64
NPL3Q01560 TDA7YNL176C 1911 nt4.78□□□□□ -1.64
NPL3Q01560 MTH1YDR277C 1302 nt4.77□□□□□ -1.65
NPL3Q01560 HRR25YPL204W 1485 nt4.77□□□□□ -1.65 RIP-Chip
NPL3Q01560 MMT2YPL224C 1455 nt4.77□□□□□ -1.65
NPL3Q01560 YCR001WYCR001W 315 nt4.77□□□□□ -1.65
NPL3Q01560 YCR085WYCR085W 354 nt4.77□□□□□ -1.65
NPL3Q01560 DTD1YDL219W 453 nt4.77□□□□□ -1.65
NPL3Q01560 SNO3YFL060C 669 nt4.77□□□□□ -1.65
NPL3Q01560 YHR180WYHR180W 492 nt4.77□□□□□ -1.65
NPL3Q01560 YAL065CYAL065C 387 nt4.77□□□□□ -1.65
NPL3Q01560 SEN15YMR059W 387 nt4.77□□□□□ -1.65 RIP-Chip
NPL3Q01560 MRP21YBL090W 534 nt4.77□□□□□ -1.65 RIP-Chip
NPL3Q01560 SNO2YNL334C 669 nt4.77□□□□□ -1.65
NPL3Q01560 BRX1YOL077C 876 nt4.77□□□□□ -1.65
NPL3Q01560 snR10snR10 245 nt4.77□□□□□ -1.65
NPL3Q01560 FEX1YOR390W 1128 nt4.77□□□□□ -1.65
NPL3Q01560 MET31YPL038W 534 nt4.77□□□□□ -1.65 RIP-Chip
NPL3Q01560 MGR2YPL098C 342 nt4.77□□□□□ -1.65 RIP-Chip
NPL3Q01560 FEX2YPL279C 1128 nt4.77□□□□□ -1.65
NPL3Q01560 BBC1YJL020C 3474 nt4.77□□□□□ -1.65
NPL3Q01560 CAF4YKR036C 1932 nt4.77□□□□□ -1.65
NPL3Q01560 UGA3YDL170W 1587 nt4.77□□□□□ -1.65
NPL3Q01560 BUD22YMR014W 1560 nt4.77□□□□□ -1.65
NPL3Q01560 ROT2YBR229C 2865 nt4.76□□□□□ -1.65
NPL3Q01560 GLO3YER122C 1482 nt4.76□□□□□ -1.65
NPL3Q01560 CTM1YHR109W 1758 nt4.76□□□□□ -1.65
NPL3Q01560 SLC1YDL052C 912 nt4.76□□□□□ -1.65 RIP-Chip
NPL3Q01560 SLU7YDR088C 1149 nt4.76□□□□□ -1.65
NPL3Q01560 LRS4YDR439W 1044 nt4.76□□□□□ -1.65
NPL3Q01560 AGE1YDR524C 1449 nt4.76□□□□□ -1.65
NPL3Q01560 ECT1YGR007W 972 nt4.76□□□□□ -1.65
NPL3Q01560 YGR109W-AYGR109W-A 873 nt4.76□□□□□ -1.65 RIP-Chip
NPL3Q01560 IMD2YHR216W 1572 nt4.76□□□□□ -1.65
NPL3Q01560 LAS21YJL062W 2493 nt4.76□□□□□ -1.65
NPL3Q01560 BUD19YJL188C 309 nt4.76□□□□□ -1.65
NPL3Q01560 RLP24YLR009W 600 nt4.76□□□□□ -1.65 RIP-Chip
NPL3Q01560 SBE2YDR351W 2595 nt4.76□□□□□ -1.65
NPL3Q01560 NGG1YDR176W 2109 nt4.76□□□□□ -1.65
NPL3Q01560 YFL002W-BYFL002W-B 1317 nt4.75□□□□□ -1.65
NPL3Q01560 YGR161W-AYGR161W-A 1317 nt4.75□□□□□ -1.65
NPL3Q01560 YBL100W-AYBL100W-A 1317 nt4.75□□□□□ -1.65
NPL3Q01560 YCL020WYCL020W 1317 nt4.75□□□□□ -1.65
NPL3Q01560 HOM3YER052C 1584 nt4.75□□□□□ -1.65
NPL3Q01560 PHO5YBR093C 1404 nt4.75□□□□□ -1.65
NPL3Q01560 RIM1YCR028C-A 408 nt4.75□□□□□ -1.65
NPL3Q01560 FCF1YDR339C 570 nt4.75□□□□□ -1.65 RIP-Chip
NPL3Q01560 YGR042WYGR042W 816 nt4.75□□□□□ -1.65 RIP-Chip
NPL3Q01560 YGR190CYGR190C 366 nt4.75□□□□□ -1.65
NPL3Q01560 YHL002C-AYHL002C-A 489 nt4.75□□□□□ -1.65
NPL3Q01560 SSO2YMR183C 888 nt4.75□□□□□ -1.65 RIP-Chip
NPL3Q01560 YMR310CYMR310C 954 nt4.75□□□□□ -1.65
NPL3Q01560 YOL029CYOL029C 606 nt4.75□□□□□ -1.65
NPL3Q01560 RRG8YPR116W 834 nt4.75□□□□□ -1.65
NPL3Q01560 FRE1YLR214W 2061 nt4.75□□□□□ -1.65
NPL3Q01560 ASK10YGR097W 3441 nt4.75□□□□□ -1.65
NPL3Q01560 ERG9YHR190W 1335 nt4.74□□□□□ -1.65
NPL3Q01560 CLF1YLR117C 2064 nt4.74□□□□□ -1.65
NPL3Q01560 SEG2YKL105C 3399 nt4.74□□□□□ -1.65
NPL3Q01560 MAG2YLR427W 2013 nt4.74□□□□□ -1.65
NPL3Q01560 RAD28YDR030C 1521 nt4.74□□□□□ -1.65
NPL3Q01560 RCR2YDR003W 633 nt4.74□□□□□ -1.65 RIP-Chip
NPL3Q01560 TVP15YDR100W 432 nt4.74□□□□□ -1.65 RIP-Chip
NPL3Q01560 MSW1YDR268W 1140 nt4.74□□□□□ -1.65
NPL3Q01560 TFB3YDR460W 966 nt4.74□□□□□ -1.65
NPL3Q01560 RTR1YER139C 681 nt4.74□□□□□ -1.65
NPL3Q01560 AUA1YFL010W-A 285 nt4.74□□□□□ -1.65
NPL3Q01560 MNN11YJL183W 1269 nt4.74□□□□□ -1.65
NPL3Q01560 DOA1YKL213C 2148 nt4.74□□□□□ -1.65
NPL3Q01560 SRP40YKR092C 1221 nt4.74□□□□□ -1.65
NPL3Q01560 YHC1YLR298C 696 nt4.74□□□□□ -1.65 RIP-Chip
NPL3Q01560 YLR406C-AYLR406C-A 150 nt4.74□□□□□ -1.65
NPL3Q01560 GIM3YNL153C 390 nt4.74□□□□□ -1.65
NPL3Q01560 MDG1YNL173C 1101 nt4.74□□□□□ -1.65
NPL3Q01560 RPS10AYOR293W 318 nt4.74□□□□□ -1.65
NPL3Q01560 SPC29YPL124W 762 nt4.74□□□□□ -1.65
NPL3Q01560 PDR10YOR328W 4695 nt4.74□□□□□ -1.65
NPL3Q01560 MSC2YDR205W 2175 nt4.73□□□□□ -1.65
NPL3Q01560 YAP1802YGR241C 1707 nt4.73□□□□□ -1.65
NPL3Q01560 ERP3YDL018C 678 nt4.73□□□□□ -1.65
NPL3Q01560 YDR118W-AYDR118W-A 117 nt4.73□□□□□ -1.65
NPL3Q01560 DPB4YDR121W 591 nt4.73□□□□□ -1.65
NPL3Q01560 YDR133CYDR133C 336 nt4.73□□□□□ -1.65 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms