Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VLDLRP98155 AC008406.3-201ENST00000620001 1374 ntBASIC20.08■□□□□ 0.8
VLDLRP98155 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VLDLRP98155 C17orf82-201ENST00000623772 1530 ntBASIC20.07■□□□□ 0.8
VLDLRP98155 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.07■□□□□ 0.8
VLDLRP98155 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VLDLRP98155 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.07■□□□□ 0.8
VLDLRP98155 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VLDLRP98155 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VLDLRP98155 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.06■□□□□ 0.8
VLDLRP98155 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.06■□□□□ 0.8
VLDLRP98155 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VLDLRP98155 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VLDLRP98155 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.06■□□□□ 0.8
VLDLRP98155 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VLDLRP98155 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VLDLRP98155 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.06■□□□□ 0.8
VLDLRP98155 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VLDLRP98155 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VLDLRP98155 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
VLDLRP98155 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 FEM1AP4-201ENST00000443167 1987 ntBASIC20.05■□□□□ 0.8
VLDLRP98155 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VLDLRP98155 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 AC092028.1-203ENST00000608262 953 ntBASIC20.05■□□□□ 0.8
VLDLRP98155 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
VLDLRP98155 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
VLDLRP98155 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.05■□□□□ 0.8
VLDLRP98155 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.05■□□□□ 0.8
VLDLRP98155 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VLDLRP98155 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.04■□□□□ 0.8
VLDLRP98155 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VLDLRP98155 AC073130.3-201ENST00000624389 2278 ntBASIC20.04■□□□□ 0.8
VLDLRP98155 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 MIR4787-201ENST00000607364 84 ntBASIC20.04■□□□□ 0.8
VLDLRP98155 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
VLDLRP98155 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VLDLRP98155 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.04■□□□□ 0.8
VLDLRP98155 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.04■□□□□ 0.8
VLDLRP98155 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VLDLRP98155 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VLDLRP98155 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VLDLRP98155 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.03■□□□□ 0.8
VLDLRP98155 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.03■□□□□ 0.8
VLDLRP98155 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.03■□□□□ 0.8
VLDLRP98155 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.03■□□□□ 0.8
VLDLRP98155 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.03■□□□□ 0.8
VLDLRP98155 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VLDLRP98155 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.03■□□□□ 0.8
VLDLRP98155 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.03■□□□□ 0.8
VLDLRP98155 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.03■□□□□ 0.8
VLDLRP98155 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VLDLRP98155 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VLDLRP98155 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VLDLRP98155 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VLDLRP98155 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VLDLRP98155 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VLDLRP98155 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VLDLRP98155 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.02■□□□□ 0.8
VLDLRP98155 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.02■□□□□ 0.8
VLDLRP98155 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.02■□□□□ 0.8
VLDLRP98155 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.02■□□□□ 0.8
VLDLRP98155 AL499627.2-201ENST00000606283 725 ntBASIC20.02■□□□□ 0.8
VLDLRP98155 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.02■□□□□ 0.8
VLDLRP98155 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
VLDLRP98155 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VLDLRP98155 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VLDLRP98155 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms