Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL20P78556 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL20P78556 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL20P78556 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCL20P78556 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL20P78556 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CCL20P78556 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL20P78556 AL020996.1-203ENST00000536896 2307 ntBASIC16.96■□□□□ 0.31
CCL20P78556 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL20P78556 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL20P78556 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL20P78556 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCL20P78556 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL20P78556 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL20P78556 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCL20P78556 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL20P78556 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL20P78556 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCL20P78556 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCL20P78556 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCL20P78556 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCL20P78556 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL20P78556 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCL20P78556 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL20P78556 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL20P78556 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCL20P78556 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCL20P78556 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL20P78556 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCL20P78556 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL20P78556 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CCL20P78556 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL20P78556 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL20P78556 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCL20P78556 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL20P78556 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL20P78556 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCL20P78556 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL20P78556 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL20P78556 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL20P78556 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL20P78556 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL20P78556 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCL20P78556 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL20P78556 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL20P78556 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCL20P78556 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL20P78556 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL20P78556 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL20P78556 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL20P78556 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CCL20P78556 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL20P78556 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL20P78556 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL20P78556 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms