Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 AC026271.2-201ENST00000428091 497 ntBASIC19.6■□□□□ 0.73
SIRPAP78324 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.6■□□□□ 0.73
SIRPAP78324 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.6■□□□□ 0.73
SIRPAP78324 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SIRPAP78324 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIRPAP78324 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SIRPAP78324 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
SIRPAP78324 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.59■□□□□ 0.73
SIRPAP78324 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIRPAP78324 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIRPAP78324 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.59■□□□□ 0.73
SIRPAP78324 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.59■□□□□ 0.73
SIRPAP78324 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIRPAP78324 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SIRPAP78324 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 AC080038.3-201ENST00000623346 1952 ntBASIC19.59■□□□□ 0.73
SIRPAP78324 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SIRPAP78324 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SIRPAP78324 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SIRPAP78324 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.58■□□□□ 0.73
SIRPAP78324 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIRPAP78324 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIRPAP78324 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIRPAP78324 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SIRPAP78324 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.58■□□□□ 0.72
SIRPAP78324 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SIRPAP78324 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.58■□□□□ 0.72
SIRPAP78324 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIRPAP78324 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.58■□□□□ 0.72
SIRPAP78324 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIRPAP78324 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SIRPAP78324 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SIRPAP78324 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SIRPAP78324 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SIRPAP78324 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.57■□□□□ 0.72
SIRPAP78324 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SIRPAP78324 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.57■□□□□ 0.72
SIRPAP78324 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.57■□□□□ 0.72
SIRPAP78324 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.57■□□□□ 0.72
SIRPAP78324 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SIRPAP78324 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SIRPAP78324 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SIRPAP78324 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.57■□□□□ 0.72
SIRPAP78324 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIRPAP78324 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.56■□□□□ 0.72
SIRPAP78324 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPAP78324 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPAP78324 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPAP78324 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SIRPAP78324 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPAP78324 AC087742.1-201ENST00000575880 1738 ntBASIC19.56■□□□□ 0.72
SIRPAP78324 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIRPAP78324 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SIRPAP78324 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIRPAP78324 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.55■□□□□ 0.72
SIRPAP78324 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SIRPAP78324 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIRPAP78324 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SIRPAP78324 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.55■□□□□ 0.72
SIRPAP78324 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.55■□□□□ 0.72
SIRPAP78324 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.55■□□□□ 0.72
SIRPAP78324 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIRPAP78324 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIRPAP78324 MIR5787-201ENST00000611784 55 ntBASIC19.55■□□□□ 0.72
SIRPAP78324 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.55■□□□□ 0.72
SIRPAP78324 MIR6084-201ENST00000622012 110 ntBASIC19.55■□□□□ 0.72
SIRPAP78324 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.54■□□□□ 0.72
SIRPAP78324 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.54■□□□□ 0.72
SIRPAP78324 AC087623.3-201ENST00000607047 1098 ntBASIC19.54■□□□□ 0.72
SIRPAP78324 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SIRPAP78324 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.54■□□□□ 0.72
SIRPAP78324 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPAP78324 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms