Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST1H3AP68431 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
HIST1H3AP68431 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST1H3AP68431 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H3AP68431 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H3AP68431 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H3AP68431 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H3AP68431 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H3AP68431 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HIST1H3AP68431 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H3AP68431 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H3AP68431 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H3AP68431 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H3AP68431 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H3AP68431 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 FBXW4P1-201ENST00000426721 2239 ntBASIC18.82■□□□□ 0.6
HIST1H3AP68431 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 PBX2P1-201ENST00000493219 1291 ntBASIC18.82■□□□□ 0.6
HIST1H3AP68431 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST1H3AP68431 AC110285.6-201ENST00000617652 491 ntBASIC18.82■□□□□ 0.6
HIST1H3AP68431 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST1H3AP68431 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H3AP68431 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST1H3AP68431 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
HIST1H3AP68431 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 EDA-201ENST00000338901 1233 ntBASIC18.81■□□□□ 0.6
HIST1H3AP68431 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 AL034346.1-201ENST00000568244 1277 ntBASIC18.81■□□□□ 0.6
HIST1H3AP68431 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H3AP68431 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST1H3AP68431 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 IGHV3-19-201ENST00000521488 291 ntBASIC18.8■□□□□ 0.6
HIST1H3AP68431 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H3AP68431 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST1H3AP68431 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H3AP68431 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H3AP68431 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H3AP68431 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.79■□□□□ 0.6
HIST1H3AP68431 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST1H3AP68431 CLDN5-201ENST00000403084 2357 ntBASIC18.79■□□□□ 0.6
HIST1H3AP68431 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HIST1H3AP68431 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms