Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM3BP58499 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FAM3BP58499 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM3BP58499 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM3BP58499 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FAM3BP58499 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM3BP58499 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.67■□□□□ 0.26
FAM3BP58499 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM3BP58499 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM3BP58499 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM3BP58499 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FAM3BP58499 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.67■□□□□ 0.26
FAM3BP58499 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM3BP58499 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
FAM3BP58499 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM3BP58499 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM3BP58499 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM3BP58499 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FAM3BP58499 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FAM3BP58499 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
FAM3BP58499 MIR4508-201ENST00000584178 70 ntBASIC16.66■□□□□ 0.26
FAM3BP58499 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
FAM3BP58499 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM3BP58499 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 LINC01006-201ENST00000333319 2292 ntBASIC16.66■□□□□ 0.26
FAM3BP58499 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM3BP58499 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
FAM3BP58499 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
FAM3BP58499 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.65■□□□□ 0.26
FAM3BP58499 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.65■□□□□ 0.26
FAM3BP58499 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
FAM3BP58499 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FAM3BP58499 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.65■□□□□ 0.26
FAM3BP58499 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 AC010980.1-201ENST00000587192 1142 ntBASIC16.65■□□□□ 0.26
FAM3BP58499 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
FAM3BP58499 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
FAM3BP58499 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.65■□□□□ 0.26
FAM3BP58499 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM3BP58499 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
FAM3BP58499 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
FAM3BP58499 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FAM3BP58499 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
FAM3BP58499 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.64■□□□□ 0.25
FAM3BP58499 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM3BP58499 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM3BP58499 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.64■□□□□ 0.25
FAM3BP58499 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.64■□□□□ 0.25
FAM3BP58499 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FAM3BP58499 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM3BP58499 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
FAM3BP58499 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM3BP58499 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM3BP58499 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM3BP58499 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM3BP58499 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM3BP58499 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM3BP58499 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM3BP58499 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM3BP58499 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FAM3BP58499 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
FAM3BP58499 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM3BP58499 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM3BP58499 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM3BP58499 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM3BP58499 AC087393.1-201ENST00000582896 145 ntBASIC16.63■□□□□ 0.25
FAM3BP58499 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms