Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN6P56747 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN6P56747 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN6P56747 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN6P56747 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN6P56747 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CLDN6P56747 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.76■□□□□ 0.91
CLDN6P56747 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN6P56747 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.76■□□□□ 0.91
CLDN6P56747 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN6P56747 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN6P56747 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN6P56747 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN6P56747 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN6P56747 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN6P56747 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN6P56747 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN6P56747 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN6P56747 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLDN6P56747 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLDN6P56747 AL139125.2-201ENST00000623134 1869 ntBASIC20.75■□□□□ 0.91
CLDN6P56747 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLDN6P56747 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLDN6P56747 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLDN6P56747 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN6P56747 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN6P56747 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 AC009237.3-201ENST00000393279 1427 ntBASIC20.74■□□□□ 0.91
CLDN6P56747 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLDN6P56747 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN6P56747 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.74■□□□□ 0.91
CLDN6P56747 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN6P56747 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN6P56747 AC133041.1-202ENST00000642053 222 ntBASIC20.74■□□□□ 0.91
CLDN6P56747 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN6P56747 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN6P56747 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLDN6P56747 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN6P56747 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN6P56747 RNA5SP413-201ENST00000516373 109 ntBASIC20.73■□□□□ 0.91
CLDN6P56747 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN6P56747 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN6P56747 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLDN6P56747 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN6P56747 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLDN6P56747 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN6P56747 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN6P56747 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CLDN6P56747 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN6P56747 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.72■□□□□ 0.91
CLDN6P56747 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN6P56747 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN6P56747 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN6P56747 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN6P56747 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN6P56747 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN6P56747 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN6P56747 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN6P56747 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.71■□□□□ 0.91
CLDN6P56747 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN6P56747 AC010536.3-201ENST00000620306 533 ntBASIC20.71■□□□□ 0.91
CLDN6P56747 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN6P56747 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN6P56747 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN6P56747 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN6P56747 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN6P56747 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN6P56747 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN6P56747 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN6P56747 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN6P56747 POU5F1P3-201ENST00000428824 1078 ntBASIC20.7■□□□□ 0.9
CLDN6P56747 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN6P56747 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN6P56747 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN6P56747 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN6P56747 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN6P56747 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CLDN6P56747 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN6P56747 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CLDN6P56747 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN6P56747 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN6P56747 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN6P56747 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLDN6P56747 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN6P56747 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLDN6P56747 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN6P56747 AC055733.4-201ENST00000638462 1354 ntBASIC20.69■□□□□ 0.9
CLDN6P56747 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN6P56747 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms