Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.08■□□□□ 0.81
SMSP52788 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SMSP52788 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.08■□□□□ 0.81
SMSP52788 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMSP52788 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.08■□□□□ 0.81
SMSP52788 YBX1P1-201ENST00000445822 960 ntBASIC20.08■□□□□ 0.81
SMSP52788 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.08■□□□□ 0.81
SMSP52788 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.08■□□□□ 0.81
SMSP52788 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.08■□□□□ 0.81
SMSP52788 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMSP52788 RARRES2P11-201ENST00000635158 484 ntBASIC20.08■□□□□ 0.81
SMSP52788 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMSP52788 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMSP52788 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMSP52788 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMSP52788 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SMSP52788 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.07■□□□□ 0.8
SMSP52788 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
SMSP52788 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.07■□□□□ 0.8
SMSP52788 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 AC090192.1-201ENST00000517740 490 ntBASIC20.07■□□□□ 0.8
SMSP52788 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.07■□□□□ 0.8
SMSP52788 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SMSP52788 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.07■□□□□ 0.8
SMSP52788 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.07■□□□□ 0.8
SMSP52788 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SMSP52788 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMSP52788 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.06■□□□□ 0.8
SMSP52788 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.06■□□□□ 0.8
SMSP52788 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.06■□□□□ 0.8
SMSP52788 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMSP52788 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.06■□□□□ 0.8
SMSP52788 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMSP52788 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMSP52788 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.05■□□□□ 0.8
SMSP52788 AC022517.1-201ENST00000592429 346 ntBASIC20.05■□□□□ 0.8
SMSP52788 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.05■□□□□ 0.8
SMSP52788 pRNA.6-201ENST00000610482 90 ntBASIC20.05■□□□□ 0.8
SMSP52788 pRNA.5-201ENST00000612139 90 ntBASIC20.05■□□□□ 0.8
SMSP52788 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.05■□□□□ 0.8
SMSP52788 pRNA.11-201ENST00000618423 90 ntBASIC20.05■□□□□ 0.8
SMSP52788 pRNA.13-201ENST00000619112 90 ntBASIC20.05■□□□□ 0.8
SMSP52788 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.05■□□□□ 0.8
SMSP52788 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.05■□□□□ 0.8
SMSP52788 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMSP52788 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.04■□□□□ 0.8
SMSP52788 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
SMSP52788 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.04■□□□□ 0.8
SMSP52788 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMSP52788 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMSP52788 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.04■□□□□ 0.8
SMSP52788 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.04■□□□□ 0.8
SMSP52788 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.04■□□□□ 0.8
SMSP52788 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.04■□□□□ 0.8
SMSP52788 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMSP52788 AL358852.1-201ENST00000623174 1268 ntBASIC20.04■□□□□ 0.8
SMSP52788 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMSP52788 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMSP52788 TSPY26P-201ENST00000476365 1326 ntBASIC20.03■□□□□ 0.8
SMSP52788 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.03■□□□□ 0.8
SMSP52788 FBXW4P1-201ENST00000426721 2239 ntBASIC20.03■□□□□ 0.8
SMSP52788 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMSP52788 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMSP52788 SLC47A1P1-202ENST00000449666 945 ntBASIC20.03■□□□□ 0.8
SMSP52788 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMSP52788 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMSP52788 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
SMSP52788 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
SMSP52788 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMSP52788 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMSP52788 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.02■□□□□ 0.8
SMSP52788 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMSP52788 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMSP52788 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SMSP52788 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms