Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.13■□□□□ 0.97
CLCNKAP51800 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.13■□□□□ 0.97
CLCNKAP51800 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCNKAP51800 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCNKAP51800 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCNKAP51800 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CLCNKAP51800 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.12■□□□□ 0.97
CLCNKAP51800 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCNKAP51800 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.12■□□□□ 0.97
CLCNKAP51800 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCNKAP51800 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 AC139530.1-201ENST00000575312 1977 ntBASIC21.12■□□□□ 0.97
CLCNKAP51800 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCNKAP51800 AC005224.4-201ENST00000583262 1652 ntBASIC21.12■□□□□ 0.97
CLCNKAP51800 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCNKAP51800 AC068473.5-201ENST00000616428 2072 ntBASIC21.11■□□□□ 0.97
CLCNKAP51800 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CLCNKAP51800 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.11■□□□□ 0.97
CLCNKAP51800 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.11■□□□□ 0.97
CLCNKAP51800 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.11■□□□□ 0.97
CLCNKAP51800 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.11■□□□□ 0.97
CLCNKAP51800 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.11■□□□□ 0.97
CLCNKAP51800 AL034346.1-201ENST00000568244 1277 ntBASIC21.11■□□□□ 0.97
CLCNKAP51800 NTF6G-201ENST00000591094 616 ntBASIC21.11■□□□□ 0.97
CLCNKAP51800 AC092666.2-201ENST00000613287 246 ntBASIC21.11■□□□□ 0.97
CLCNKAP51800 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCNKAP51800 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCNKAP51800 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCNKAP51800 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCNKAP51800 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CLCNKAP51800 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCNKAP51800 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CLCNKAP51800 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCNKAP51800 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCNKAP51800 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 AC133561.1-201ENST00000568600 2415 ntBASIC21.09■□□□□ 0.97
CLCNKAP51800 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CLCNKAP51800 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CLCNKAP51800 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.09■□□□□ 0.97
CLCNKAP51800 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCNKAP51800 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CLCNKAP51800 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLCNKAP51800 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.09■□□□□ 0.97
CLCNKAP51800 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCNKAP51800 AC127496.7-201ENST00000625110 1798 ntBASIC21.08■□□□□ 0.97
CLCNKAP51800 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCNKAP51800 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CLCNKAP51800 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCNKAP51800 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCNKAP51800 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCNKAP51800 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCNKAP51800 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.08■□□□□ 0.97
CLCNKAP51800 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.08■□□□□ 0.97
CLCNKAP51800 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CLCNKAP51800 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLCNKAP51800 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCNKAP51800 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCNKAP51800 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLCNKAP51800 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 AC080038.3-201ENST00000623346 1952 ntBASIC21.07■□□□□ 0.96
CLCNKAP51800 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLCNKAP51800 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCNKAP51800 AP004607.7-201ENST00000527152 1677 ntBASIC21.07■□□□□ 0.96
CLCNKAP51800 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCNKAP51800 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms