Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
THBS3P49746 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS3P49746 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
THBS3P49746 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS3P49746 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 AL024507.2-201ENST00000606070 2574 ntBASIC17.75■□□□□ 0.43
THBS3P49746 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.75■□□□□ 0.43
THBS3P49746 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 AC096631.2-201ENST00000436136 790 ntBASIC17.75■□□□□ 0.43
THBS3P49746 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
THBS3P49746 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS3P49746 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS3P49746 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
THBS3P49746 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.74■□□□□ 0.43
THBS3P49746 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
THBS3P49746 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.74■□□□□ 0.43
THBS3P49746 AC110285.6-201ENST00000617652 491 ntBASIC17.74■□□□□ 0.43
THBS3P49746 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS3P49746 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS3P49746 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS3P49746 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS3P49746 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS3P49746 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
THBS3P49746 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
THBS3P49746 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.73■□□□□ 0.43
THBS3P49746 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.73■□□□□ 0.43
THBS3P49746 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS3P49746 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS3P49746 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
THBS3P49746 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
THBS3P49746 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.72■□□□□ 0.43
THBS3P49746 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS3P49746 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS3P49746 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS3P49746 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS3P49746 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.72■□□□□ 0.43
THBS3P49746 AC133637.1-201ENST00000624115 1537 ntBASIC17.72■□□□□ 0.43
THBS3P49746 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS3P49746 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS3P49746 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.72■□□□□ 0.43
THBS3P49746 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.71■□□□□ 0.43
THBS3P49746 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.71■□□□□ 0.43
THBS3P49746 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.71■□□□□ 0.43
THBS3P49746 pRNA.6-201ENST00000610482 90 ntBASIC17.71■□□□□ 0.43
THBS3P49746 pRNA.5-201ENST00000612139 90 ntBASIC17.71■□□□□ 0.43
THBS3P49746 pRNA.11-201ENST00000618423 90 ntBASIC17.71■□□□□ 0.43
THBS3P49746 pRNA.13-201ENST00000619112 90 ntBASIC17.71■□□□□ 0.43
THBS3P49746 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.71■□□□□ 0.43
THBS3P49746 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
THBS3P49746 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS3P49746 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.71■□□□□ 0.42
THBS3P49746 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
THBS3P49746 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
THBS3P49746 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
THBS3P49746 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.7■□□□□ 0.42
THBS3P49746 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.7■□□□□ 0.42
THBS3P49746 AC092171.4-201ENST00000609130 632 ntBASIC17.7■□□□□ 0.42
THBS3P49746 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
THBS3P49746 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.7■□□□□ 0.42
THBS3P49746 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS3P49746 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms