Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1EP49674 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.23■□□□□ 0.99
CSNK1EP49674 KRT18P6-201ENST00000555540 1265 ntBASIC21.23■□□□□ 0.99
CSNK1EP49674 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.23■□□□□ 0.99
CSNK1EP49674 AP004607.7-201ENST00000527152 1677 ntBASIC21.23■□□□□ 0.99
CSNK1EP49674 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1EP49674 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1EP49674 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CSNK1EP49674 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CSNK1EP49674 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.22■□□□□ 0.99
CSNK1EP49674 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1EP49674 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.22■□□□□ 0.99
CSNK1EP49674 AC092068.2-201ENST00000590491 1708 ntBASIC21.21■□□□□ 0.99
CSNK1EP49674 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
CSNK1EP49674 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1EP49674 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1EP49674 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CSNK1EP49674 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1EP49674 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1EP49674 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1EP49674 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1EP49674 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.2■□□□□ 0.99
CSNK1EP49674 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CSNK1EP49674 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1EP49674 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1EP49674 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1EP49674 CNN2P6-201ENST00000439038 900 ntBASIC21.2■□□□□ 0.98
CSNK1EP49674 AF201337.1-201ENST00000520239 748 ntBASIC21.2■□□□□ 0.98
CSNK1EP49674 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.2■□□□□ 0.98
CSNK1EP49674 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.2■□□□□ 0.98
CSNK1EP49674 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSNK1EP49674 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.19■□□□□ 0.98
CSNK1EP49674 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.19■□□□□ 0.98
CSNK1EP49674 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CSNK1EP49674 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.19■□□□□ 0.98
CSNK1EP49674 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CSNK1EP49674 AC010141.2-201ENST00000452426 721 ntBASIC21.19■□□□□ 0.98
CSNK1EP49674 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.19■□□□□ 0.98
CSNK1EP49674 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.19■□□□□ 0.98
CSNK1EP49674 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1EP49674 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CSNK1EP49674 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
CSNK1EP49674 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1EP49674 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1EP49674 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.18■□□□□ 0.98
CSNK1EP49674 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.18■□□□□ 0.98
CSNK1EP49674 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1EP49674 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CSNK1EP49674 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.18■□□□□ 0.98
CSNK1EP49674 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1EP49674 AC105036.2-201ENST00000569468 176 ntBASIC21.18■□□□□ 0.98
CSNK1EP49674 AC138907.5-202ENST00000569484 235 ntBASIC21.18■□□□□ 0.98
CSNK1EP49674 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.18■□□□□ 0.98
CSNK1EP49674 AC010536.3-201ENST00000620306 533 ntBASIC21.18■□□□□ 0.98
CSNK1EP49674 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.18■□□□□ 0.98
CSNK1EP49674 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.18■□□□□ 0.98
CSNK1EP49674 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1EP49674 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1EP49674 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1EP49674 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.17■□□□□ 0.98
CSNK1EP49674 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.17■□□□□ 0.98
CSNK1EP49674 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1EP49674 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.17■□□□□ 0.98
CSNK1EP49674 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1EP49674 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1EP49674 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CSNK1EP49674 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.17■□□□□ 0.98
CSNK1EP49674 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.17■□□□□ 0.98
CSNK1EP49674 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1EP49674 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1EP49674 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1EP49674 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CSNK1EP49674 KRT18P20-201ENST00000548986 1279 ntBASIC21.16■□□□□ 0.98
CSNK1EP49674 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1EP49674 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.16■□□□□ 0.98
CSNK1EP49674 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.16■□□□□ 0.98
CSNK1EP49674 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.16■□□□□ 0.98
CSNK1EP49674 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.16■□□□□ 0.98
CSNK1EP49674 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CSNK1EP49674 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CSNK1EP49674 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms