Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.24■□□□□ 0.67
SOX6P35712 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.24■□□□□ 0.67
SOX6P35712 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SOX6P35712 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX6P35712 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SOX6P35712 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.23■□□□□ 0.67
SOX6P35712 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SOX6P35712 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SOX6P35712 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SOX6P35712 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 AC009831.1-201ENST00000580420 1582 ntBASIC19.23■□□□□ 0.67
SOX6P35712 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX6P35712 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SOX6P35712 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX6P35712 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.22■□□□□ 0.67
SOX6P35712 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX6P35712 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SOX6P35712 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX6P35712 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SOX6P35712 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX6P35712 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX6P35712 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX6P35712 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SOX6P35712 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.21■□□□□ 0.67
SOX6P35712 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.21■□□□□ 0.67
SOX6P35712 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX6P35712 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SOX6P35712 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.21■□□□□ 0.67
SOX6P35712 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SOX6P35712 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SOX6P35712 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX6P35712 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX6P35712 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.2■□□□□ 0.66
SOX6P35712 NTF6A-201ENST00000591175 560 ntBASIC19.2■□□□□ 0.66
SOX6P35712 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SOX6P35712 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SOX6P35712 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX6P35712 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SOX6P35712 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 U85056.1-201ENST00000616429 682 ntBASIC19.19■□□□□ 0.66
SOX6P35712 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SOX6P35712 LINC01960-201ENST00000563759 1884 ntBASIC19.19■□□□□ 0.66
SOX6P35712 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SOX6P35712 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX6P35712 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.19■□□□□ 0.66
SOX6P35712 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SOX6P35712 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.19■□□□□ 0.66
SOX6P35712 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
SOX6P35712 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
SOX6P35712 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SOX6P35712 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SOX6P35712 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX6P35712 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SOX6P35712 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms