Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCND1P24385 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.57■■□□□ 1.04
CCND1P24385 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCND1P24385 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.57■■□□□ 1.04
CCND1P24385 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCND1P24385 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCND1P24385 SRD5A1P1-201ENST00000442297 786 ntBASIC21.57■■□□□ 1.04
CCND1P24385 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.57■■□□□ 1.04
CCND1P24385 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.57■■□□□ 1.04
CCND1P24385 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.57■■□□□ 1.04
CCND1P24385 AC092171.4-201ENST00000609130 632 ntBASIC21.57■■□□□ 1.04
CCND1P24385 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.57■■□□□ 1.04
CCND1P24385 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CCND1P24385 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCND1P24385 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
CCND1P24385 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CCND1P24385 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCND1P24385 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.56■■□□□ 1.04
CCND1P24385 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCND1P24385 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCND1P24385 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCND1P24385 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.56■■□□□ 1.04
CCND1P24385 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCND1P24385 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.56■■□□□ 1.04
CCND1P24385 AC009086.3-201ENST00000623486 1008 ntBASIC21.56■■□□□ 1.04
CCND1P24385 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.56■■□□□ 1.04
CCND1P24385 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCND1P24385 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCND1P24385 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.55■■□□□ 1.04
CCND1P24385 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.55■■□□□ 1.04
CCND1P24385 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.55■■□□□ 1.04
CCND1P24385 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.55■■□□□ 1.04
CCND1P24385 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.55■■□□□ 1.04
CCND1P24385 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.55■■□□□ 1.04
CCND1P24385 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.55■■□□□ 1.04
CCND1P24385 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCND1P24385 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.55■■□□□ 1.04
CCND1P24385 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.55■■□□□ 1.04
CCND1P24385 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
CCND1P24385 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCND1P24385 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.54■■□□□ 1.04
CCND1P24385 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCND1P24385 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCND1P24385 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
CCND1P24385 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.53■■□□□ 1.04
CCND1P24385 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCND1P24385 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.53■■□□□ 1.04
CCND1P24385 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.53■■□□□ 1.04
CCND1P24385 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCND1P24385 AC131212.1-201ENST00000613771 668 ntBASIC21.53■■□□□ 1.04
CCND1P24385 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCND1P24385 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCND1P24385 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCND1P24385 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCND1P24385 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCND1P24385 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCND1P24385 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCND1P24385 AC007952.6-201ENST00000573168 2673 ntBASIC21.52■■□□□ 1.04
CCND1P24385 AC003957.1-201ENST00000625108 2673 ntBASIC21.52■■□□□ 1.04
CCND1P24385 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCND1P24385 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.52■■□□□ 1.04
CCND1P24385 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCND1P24385 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCND1P24385 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.51■■□□□ 1.03
CCND1P24385 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCND1P24385 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCND1P24385 LINC01521-201ENST00000504184 1943 ntBASIC21.51■■□□□ 1.03
CCND1P24385 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCND1P24385 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCND1P24385 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCND1P24385 FAM99A-202ENST00000538190 1989 ntBASIC21.51■■□□□ 1.03
CCND1P24385 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCND1P24385 AC131281.2-201ENST00000520478 145 ntBASIC21.51■■□□□ 1.03
CCND1P24385 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.51■■□□□ 1.03
CCND1P24385 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCND1P24385 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCND1P24385 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCND1P24385 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCND1P24385 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.51■■□□□ 1.03
CCND1P24385 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCND1P24385 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCND1P24385 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms