Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV3P03979 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
TRGV3P03979 OR7E47P-201ENST00000546390 1422 ntBASIC16.91■□□□□ 0.3
TRGV3P03979 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRGV3P03979 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV3P03979 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.91■□□□□ 0.3
TRGV3P03979 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.91■□□□□ 0.3
TRGV3P03979 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV3P03979 AC080038.3-201ENST00000623346 1952 ntBASIC16.91■□□□□ 0.3
TRGV3P03979 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
TRGV3P03979 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.9■□□□□ 0.3
TRGV3P03979 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.9■□□□□ 0.3
TRGV3P03979 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.9■□□□□ 0.3
TRGV3P03979 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.9■□□□□ 0.3
TRGV3P03979 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRGV3P03979 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 MIR572-201ENST00000384983 95 ntBASIC16.9■□□□□ 0.3
TRGV3P03979 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.9■□□□□ 0.3
TRGV3P03979 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 CLDN5-201ENST00000403084 2357 ntBASIC16.9■□□□□ 0.3
TRGV3P03979 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRGV3P03979 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV3P03979 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
TRGV3P03979 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 AC242852.2-201ENST00000615738 1807 ntBASIC16.89■□□□□ 0.29
TRGV3P03979 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 IRS3P-201ENST00000223076 1006 ntBASIC16.89■□□□□ 0.29
TRGV3P03979 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.89■□□□□ 0.29
TRGV3P03979 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.89■□□□□ 0.29
TRGV3P03979 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.89■□□□□ 0.29
TRGV3P03979 AC105233.4-201ENST00000642045 216 ntBASIC16.89■□□□□ 0.29
TRGV3P03979 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.89■□□□□ 0.29
TRGV3P03979 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV3P03979 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRGV3P03979 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRGV3P03979 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TRGV3P03979 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.88■□□□□ 0.29
TRGV3P03979 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.88■□□□□ 0.29
TRGV3P03979 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TRGV3P03979 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV3P03979 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TRGV3P03979 AC019069.1-201ENST00000610008 1333 ntBASIC16.88■□□□□ 0.29
TRGV3P03979 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
TRGV3P03979 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
TRGV3P03979 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRGV3P03979 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 LINC00526-201ENST00000581067 1875 ntBASIC16.87■□□□□ 0.29
TRGV3P03979 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.87■□□□□ 0.29
TRGV3P03979 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.87■□□□□ 0.29
TRGV3P03979 AL117328.2-201ENST00000624617 1940 ntBASIC16.87■□□□□ 0.29
TRGV3P03979 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRGV3P03979 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRGV3P03979 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV3P03979 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRGV3P03979 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV3P03979 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV3P03979 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRGV3P03979 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.86■□□□□ 0.29
TRGV3P03979 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV3P03979 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV3P03979 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRGV3P03979 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV3P03979 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.86■□□□□ 0.29
TRGV3P03979 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.86■□□□□ 0.29
TRGV3P03979 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms