Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND3P03897 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.86■■□□□ 1.09
MT-ND3P03897 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.86■■□□□ 1.09
MT-ND3P03897 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND3P03897 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND3P03897 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MT-ND3P03897 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.86■■□□□ 1.09
MT-ND3P03897 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.85■■□□□ 1.09
MT-ND3P03897 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MT-ND3P03897 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND3P03897 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND3P03897 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MT-ND3P03897 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND3P03897 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND3P03897 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
MT-ND3P03897 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.85■■□□□ 1.09
MT-ND3P03897 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.85■■□□□ 1.09
MT-ND3P03897 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MT-ND3P03897 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.84■■□□□ 1.09
MT-ND3P03897 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.84■■□□□ 1.09
MT-ND3P03897 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.84■■□□□ 1.09
MT-ND3P03897 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.84■■□□□ 1.09
MT-ND3P03897 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
MT-ND3P03897 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MT-ND3P03897 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.83■■□□□ 1.09
MT-ND3P03897 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MT-ND3P03897 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.83■■□□□ 1.09
MT-ND3P03897 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.83■■□□□ 1.09
MT-ND3P03897 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.83■■□□□ 1.09
MT-ND3P03897 AC106739.1-201ENST00000617035 715 ntBASIC21.83■■□□□ 1.09
MT-ND3P03897 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.83■■□□□ 1.09
MT-ND3P03897 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MT-ND3P03897 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MT-ND3P03897 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MT-ND3P03897 AC004687.1-201ENST00000579003 1625 ntBASIC21.83■■□□□ 1.08
MT-ND3P03897 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.83■■□□□ 1.08
MT-ND3P03897 AC244015.2-201ENST00000616358 1861 ntBASIC21.83■■□□□ 1.08
MT-ND3P03897 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MT-ND3P03897 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MT-ND3P03897 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MT-ND3P03897 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.83■■□□□ 1.08
MT-ND3P03897 AC005229.4-201ENST00000610085 2198 ntBASIC21.82■■□□□ 1.08
MT-ND3P03897 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND3P03897 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.82■■□□□ 1.08
MT-ND3P03897 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND3P03897 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND3P03897 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
MT-ND3P03897 CA15P2-201ENST00000611168 834 ntBASIC21.82■■□□□ 1.08
MT-ND3P03897 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND3P03897 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND3P03897 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-ND3P03897 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
MT-ND3P03897 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MT-ND3P03897 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.81■■□□□ 1.08
MT-ND3P03897 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 PBX2P1-201ENST00000493219 1291 ntBASIC21.81■■□□□ 1.08
MT-ND3P03897 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.81■■□□□ 1.08
MT-ND3P03897 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.81■■□□□ 1.08
MT-ND3P03897 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MT-ND3P03897 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
MT-ND3P03897 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-ND3P03897 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.8■■□□□ 1.08
MT-ND3P03897 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.8■■□□□ 1.08
MT-ND3P03897 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
MT-ND3P03897 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.8■■□□□ 1.08
MT-ND3P03897 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
MT-ND3P03897 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.8■■□□□ 1.08
MT-ND3P03897 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MT-ND3P03897 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
MT-ND3P03897 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND3P03897 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MT-ND3P03897 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-ND3P03897 DUX4L19-201ENST00000557448 1267 ntBASIC21.79■■□□□ 1.08
MT-ND3P03897 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-ND3P03897 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.79■■□□□ 1.08
MT-ND3P03897 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms