Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KRT6AP02538 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT6AP02538 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
KRT6AP02538 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
KRT6AP02538 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
KRT6AP02538 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KRT6AP02538 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
KRT6AP02538 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT6AP02538 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT6AP02538 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT6AP02538 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.83■□□□□ 0.93
KRT6AP02538 AC007375.3-201ENST00000600936 2314 ntBASIC20.83■□□□□ 0.93
KRT6AP02538 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT6AP02538 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT6AP02538 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT6AP02538 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT6AP02538 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT6AP02538 SERBP1P1-201ENST00000396021 1160 ntBASIC20.83■□□□□ 0.93
KRT6AP02538 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
KRT6AP02538 MIR4466-201ENST00000606121 54 ntBASIC20.83■□□□□ 0.93
KRT6AP02538 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT6AP02538 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT6AP02538 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT6AP02538 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
KRT6AP02538 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT6AP02538 AC010141.3-201ENST00000456659 717 ntBASIC20.82■□□□□ 0.92
KRT6AP02538 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT6AP02538 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT6AP02538 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
KRT6AP02538 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT6AP02538 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT6AP02538 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT6AP02538 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
KRT6AP02538 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT6AP02538 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT6AP02538 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT6AP02538 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT6AP02538 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT6AP02538 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT6AP02538 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT6AP02538 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT6AP02538 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
KRT6AP02538 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
KRT6AP02538 AC131281.2-201ENST00000520478 145 ntBASIC20.8■□□□□ 0.92
KRT6AP02538 AC010525.1-201ENST00000585559 441 ntBASIC20.8■□□□□ 0.92
KRT6AP02538 AC011298.3-201ENST00000615796 283 ntBASIC20.8■□□□□ 0.92
KRT6AP02538 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT6AP02538 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
KRT6AP02538 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT6AP02538 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT6AP02538 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT6AP02538 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT6AP02538 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
KRT6AP02538 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
KRT6AP02538 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.79■□□□□ 0.92
KRT6AP02538 AC136469.2-201ENST00000623944 1028 ntBASIC20.79■□□□□ 0.92
KRT6AP02538 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT6AP02538 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT6AP02538 AC244015.2-201ENST00000616358 1861 ntBASIC20.79■□□□□ 0.92
KRT6AP02538 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
KRT6AP02538 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT6AP02538 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
KRT6AP02538 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT6AP02538 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
KRT6AP02538 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT6AP02538 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT6AP02538 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT6AP02538 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT6AP02538 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KRT6AP02538 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT6AP02538 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KRT6AP02538 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT6AP02538 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT6AP02538 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms