Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.17■■□□□ 1.78
COL1A1P02452 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.16■■□□□ 1.78
COL1A1P02452 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
COL1A1P02452 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
COL1A1P02452 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A1P02452 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A1P02452 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A1P02452 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A1P02452 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL1A1P02452 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.16■■□□□ 1.78
COL1A1P02452 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.15■■□□□ 1.78
COL1A1P02452 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL1A1P02452 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.15■■□□□ 1.78
COL1A1P02452 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL1A1P02452 AP004607.7-201ENST00000527152 1677 ntBASIC26.14■■□□□ 1.78
COL1A1P02452 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL1A1P02452 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL1A1P02452 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.14■■□□□ 1.78
COL1A1P02452 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.14■■□□□ 1.78
COL1A1P02452 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL1A1P02452 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
COL1A1P02452 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.14■■□□□ 1.77
COL1A1P02452 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL1A1P02452 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL1A1P02452 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
COL1A1P02452 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.13■■□□□ 1.77
COL1A1P02452 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.13■■□□□ 1.77
COL1A1P02452 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 MFSD11-216ENST00000590393 1141 ntBASIC26.13■■□□□ 1.77
COL1A1P02452 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 AC011767.1-201ENST00000617410 1153 ntBASIC26.13■■□□□ 1.77
COL1A1P02452 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 OR7E47P-201ENST00000546390 1422 ntBASIC26.13■■□□□ 1.77
COL1A1P02452 ESRRAP2-201ENST00000418437 1549 ntBASIC26.13■■□□□ 1.77
COL1A1P02452 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.13■■□□□ 1.77
COL1A1P02452 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
COL1A1P02452 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL1A1P02452 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.12■■□□□ 1.77
COL1A1P02452 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A1P02452 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.12■■□□□ 1.77
COL1A1P02452 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.12■■□□□ 1.77
COL1A1P02452 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.12■■□□□ 1.77
COL1A1P02452 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.12■■□□□ 1.77
COL1A1P02452 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A1P02452 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A1P02452 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A1P02452 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL1A1P02452 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.12■■□□□ 1.77
COL1A1P02452 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A1P02452 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A1P02452 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
COL1A1P02452 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
COL1A1P02452 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
COL1A1P02452 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A1P02452 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A1P02452 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A1P02452 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL1A1P02452 UBE2DNL-204ENST00000602536 740 ntBASIC26.11■■□□□ 1.77
COL1A1P02452 AP006587.3-201ENST00000525742 1516 ntBASIC26.1■■□□□ 1.77
COL1A1P02452 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.1■■□□□ 1.77
COL1A1P02452 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.1■■□□□ 1.77
COL1A1P02452 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.1■■□□□ 1.77
COL1A1P02452 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.1■■□□□ 1.77
COL1A1P02452 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.1■■□□□ 1.77
COL1A1P02452 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.1■■□□□ 1.77
COL1A1P02452 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL1A1P02452 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
COL1A1P02452 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A1P02452 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A1P02452 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A1P02452 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A1P02452 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.09■■□□□ 1.77
COL1A1P02452 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.09■■□□□ 1.77
COL1A1P02452 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.09■■□□□ 1.77
COL1A1P02452 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.09■■□□□ 1.77
COL1A1P02452 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A1P02452 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL1A1P02452 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL1A1P02452 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.08■■□□□ 1.77
COL1A1P02452 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL1A1P02452 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.08■■□□□ 1.77
COL1A1P02452 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL1A1P02452 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL1A1P02452 AC142086.2-201ENST00000569753 217 ntBASIC26.08■■□□□ 1.77
COL1A1P02452 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
COL1A1P02452 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.08■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms