Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
TDP2O95551 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.45■■□□□ 1.5
TDP2O95551 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.45■■□□□ 1.5
TDP2O95551 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TDP2O95551 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TDP2O95551 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TDP2O95551 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TDP2O95551 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TDP2O95551 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TDP2O95551 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
TDP2O95551 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TDP2O95551 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.44■■□□□ 1.5
TDP2O95551 YBX1P1-201ENST00000445822 960 ntBASIC24.44■■□□□ 1.5
TDP2O95551 RARRES2P6-201ENST00000567333 442 ntBASIC24.44■■□□□ 1.5
TDP2O95551 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TDP2O95551 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.44■■□□□ 1.5
TDP2O95551 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.44■■□□□ 1.5
TDP2O95551 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.44■■□□□ 1.5
TDP2O95551 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TDP2O95551 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TDP2O95551 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TDP2O95551 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.44■■□□□ 1.5
TDP2O95551 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TDP2O95551 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.43■■□□□ 1.5
TDP2O95551 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TDP2O95551 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TDP2O95551 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TDP2O95551 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TDP2O95551 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TDP2O95551 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TDP2O95551 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.43■■□□□ 1.5
TDP2O95551 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.42■■□□□ 1.5
TDP2O95551 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.42■■□□□ 1.5
TDP2O95551 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.42■■□□□ 1.5
TDP2O95551 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
TDP2O95551 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TDP2O95551 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.42■■□□□ 1.5
TDP2O95551 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TDP2O95551 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.41■■□□□ 1.5
TDP2O95551 AC092053.2-201ENST00000640557 1818 ntBASIC24.41■■□□□ 1.5
TDP2O95551 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TDP2O95551 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
TDP2O95551 AC087623.3-201ENST00000607047 1098 ntBASIC24.41■■□□□ 1.5
TDP2O95551 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
TDP2O95551 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.41■■□□□ 1.5
TDP2O95551 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TDP2O95551 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.4■■□□□ 1.5
TDP2O95551 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TDP2O95551 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 AC097381.1-201ENST00000429019 1296 ntBASIC24.4■■□□□ 1.5
TDP2O95551 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.4■■□□□ 1.5
TDP2O95551 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.4■■□□□ 1.5
TDP2O95551 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TDP2O95551 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.4■■□□□ 1.5
TDP2O95551 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.4■■□□□ 1.5
TDP2O95551 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TDP2O95551 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TDP2O95551 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.39■■□□□ 1.5
TDP2O95551 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TDP2O95551 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.39■■□□□ 1.5
TDP2O95551 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TDP2O95551 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TDP2O95551 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.39■■□□□ 1.49
TDP2O95551 MIR6821-201ENST00000617625 74 ntBASIC24.39■■□□□ 1.49
TDP2O95551 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TDP2O95551 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TDP2O95551 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TDP2O95551 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TDP2O95551 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TDP2O95551 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TDP2O95551 AC005224.4-201ENST00000583262 1652 ntBASIC24.38■■□□□ 1.49
TDP2O95551 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TDP2O95551 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TDP2O95551 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TDP2O95551 AC123595.1-201ENST00000440769 1046 ntBASIC24.38■■□□□ 1.49
TDP2O95551 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.38■■□□□ 1.49
TDP2O95551 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TDP2O95551 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TDP2O95551 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.37■■□□□ 1.49
TDP2O95551 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.37■■□□□ 1.49
TDP2O95551 AC026471.6-201ENST00000622954 1905 ntBASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms