Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6DO43924 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.69■□□□□ 0.26
PDE6DO43924 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6DO43924 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.69■□□□□ 0.26
PDE6DO43924 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6DO43924 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6DO43924 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDE6DO43924 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
PDE6DO43924 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDE6DO43924 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.68■□□□□ 0.26
PDE6DO43924 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDE6DO43924 LINC01529-204ENST00000636474 1715 ntBASIC16.67■□□□□ 0.26
PDE6DO43924 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6DO43924 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6DO43924 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6DO43924 OXCT2P1-201ENST00000447263 1535 ntBASIC16.67■□□□□ 0.26
PDE6DO43924 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.67■□□□□ 0.26
PDE6DO43924 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.67■□□□□ 0.26
PDE6DO43924 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.67■□□□□ 0.26
PDE6DO43924 CA15P2-201ENST00000611168 834 ntBASIC16.67■□□□□ 0.26
PDE6DO43924 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6DO43924 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PDE6DO43924 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDE6DO43924 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.67■□□□□ 0.26
PDE6DO43924 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDE6DO43924 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6DO43924 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6DO43924 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6DO43924 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PDE6DO43924 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6DO43924 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6DO43924 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.66■□□□□ 0.26
PDE6DO43924 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDE6DO43924 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDE6DO43924 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PDE6DO43924 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDE6DO43924 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 AC009831.1-201ENST00000580420 1582 ntBASIC16.65■□□□□ 0.26
PDE6DO43924 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
PDE6DO43924 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDE6DO43924 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 AC133552.2-201ENST00000619106 1032 ntBASIC16.65■□□□□ 0.26
PDE6DO43924 AC009086.3-201ENST00000623486 1008 ntBASIC16.65■□□□□ 0.26
PDE6DO43924 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.65■□□□□ 0.26
PDE6DO43924 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PDE6DO43924 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDE6DO43924 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDE6DO43924 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDE6DO43924 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PDE6DO43924 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDE6DO43924 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6DO43924 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDE6DO43924 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms