Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VEGFDO43915 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VEGFDO43915 AC233723.2-201ENST00000623798 2106 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.19■□□□□ 0.98
VEGFDO43915 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.19■□□□□ 0.98
VEGFDO43915 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L2-201ENST00000561772 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L6-201ENST00000626483 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L1-201ENST00000627662 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L8-201ENST00000629013 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L3-201ENST00000630187 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L7-201ENST00000630678 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 DUX4L5-201ENST00000630834 1275 ntBASIC21.19■□□□□ 0.98
VEGFDO43915 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
VEGFDO43915 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VEGFDO43915 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
VEGFDO43915 AC242852.2-201ENST00000615738 1807 ntBASIC21.18■□□□□ 0.98
VEGFDO43915 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.18■□□□□ 0.98
VEGFDO43915 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.18■□□□□ 0.98
VEGFDO43915 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.18■□□□□ 0.98
VEGFDO43915 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VEGFDO43915 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VEGFDO43915 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VEGFDO43915 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VEGFDO43915 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.17■□□□□ 0.98
VEGFDO43915 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.17■□□□□ 0.98
VEGFDO43915 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.17■□□□□ 0.98
VEGFDO43915 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.17■□□□□ 0.98
VEGFDO43915 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VEGFDO43915 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.17■□□□□ 0.98
VEGFDO43915 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
VEGFDO43915 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VEGFDO43915 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.16■□□□□ 0.98
VEGFDO43915 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VEGFDO43915 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.16■□□□□ 0.98
VEGFDO43915 AC092053.2-201ENST00000640557 1818 ntBASIC21.16■□□□□ 0.98
VEGFDO43915 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VEGFDO43915 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VEGFDO43915 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.16■□□□□ 0.98
VEGFDO43915 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.16■□□□□ 0.98
VEGFDO43915 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.16■□□□□ 0.98
VEGFDO43915 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VEGFDO43915 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VEGFDO43915 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VEGFDO43915 AC055733.4-201ENST00000638462 1354 ntBASIC21.16■□□□□ 0.98
VEGFDO43915 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.16■□□□□ 0.98
VEGFDO43915 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.16■□□□□ 0.98
VEGFDO43915 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.16■□□□□ 0.98
VEGFDO43915 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.16■□□□□ 0.98
VEGFDO43915 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VEGFDO43915 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.16■□□□□ 0.98
VEGFDO43915 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.15■□□□□ 0.98
VEGFDO43915 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VEGFDO43915 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VEGFDO43915 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VEGFDO43915 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.15■□□□□ 0.98
VEGFDO43915 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.15■□□□□ 0.98
VEGFDO43915 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
VEGFDO43915 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VEGFDO43915 GUSBP5-202ENST00000510805 1989 ntBASIC21.15■□□□□ 0.98
VEGFDO43915 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VEGFDO43915 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VEGFDO43915 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VEGFDO43915 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
VEGFDO43915 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VEGFDO43915 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VEGFDO43915 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VEGFDO43915 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.14■□□□□ 0.98
VEGFDO43915 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
VEGFDO43915 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.14■□□□□ 0.97
VEGFDO43915 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VEGFDO43915 AC079140.4-201ENST00000507448 529 ntBASIC21.14■□□□□ 0.97
VEGFDO43915 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.14■□□□□ 0.97
VEGFDO43915 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VEGFDO43915 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.14■□□□□ 0.97
VEGFDO43915 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms