Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.07■□□□□ 0.8
AP3D1O14617 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP3D1O14617 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP3D1O14617 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
AP3D1O14617 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3D1O14617 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
AP3D1O14617 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.06■□□□□ 0.8
AP3D1O14617 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.06■□□□□ 0.8
AP3D1O14617 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP3D1O14617 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 CA15P2-201ENST00000611168 834 ntBASIC20.06■□□□□ 0.8
AP3D1O14617 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
AP3D1O14617 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP3D1O14617 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3D1O14617 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 FBXW4P1-201ENST00000426721 2239 ntBASIC20.06■□□□□ 0.8
AP3D1O14617 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
AP3D1O14617 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
AP3D1O14617 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
AP3D1O14617 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
AP3D1O14617 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 AC131212.1-201ENST00000613771 668 ntBASIC20.05■□□□□ 0.8
AP3D1O14617 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
AP3D1O14617 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
AP3D1O14617 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.05■□□□□ 0.8
AP3D1O14617 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3D1O14617 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3D1O14617 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3D1O14617 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP3D1O14617 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3D1O14617 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.04■□□□□ 0.8
AP3D1O14617 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
AP3D1O14617 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3D1O14617 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
AP3D1O14617 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3D1O14617 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.03■□□□□ 0.8
AP3D1O14617 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
AP3D1O14617 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.03■□□□□ 0.8
AP3D1O14617 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AP3D1O14617 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3D1O14617 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
AP3D1O14617 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3D1O14617 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3D1O14617 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3D1O14617 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3D1O14617 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.02■□□□□ 0.79
AP3D1O14617 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.01■□□□□ 0.79
AP3D1O14617 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 AC092171.4-201ENST00000609130 632 ntBASIC20.01■□□□□ 0.79
AP3D1O14617 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
AP3D1O14617 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP3D1O14617 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.01■□□□□ 0.79
AP3D1O14617 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP3D1O14617 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
AP3D1O14617 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
AP3D1O14617 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3D1O14617 SERBP1P1-201ENST00000396021 1160 ntBASIC20■□□□□ 0.79
AP3D1O14617 AL136116.3-201ENST00000402907 1138 ntBASIC20■□□□□ 0.79
AP3D1O14617 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20■□□□□ 0.79
AP3D1O14617 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
AP3D1O14617 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
AP3D1O14617 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms