Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UPK2O00526 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPK2O00526 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPK2O00526 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.27■□□□□ 0.36
UPK2O00526 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.27■□□□□ 0.36
UPK2O00526 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.27■□□□□ 0.36
UPK2O00526 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.27■□□□□ 0.36
UPK2O00526 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPK2O00526 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPK2O00526 AC010141.3-201ENST00000456659 717 ntBASIC17.27■□□□□ 0.36
UPK2O00526 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.27■□□□□ 0.36
UPK2O00526 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.27■□□□□ 0.36
UPK2O00526 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
UPK2O00526 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPK2O00526 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UPK2O00526 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK2O00526 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
UPK2O00526 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPK2O00526 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UPK2O00526 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.26■□□□□ 0.35
UPK2O00526 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UPK2O00526 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
UPK2O00526 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UPK2O00526 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UPK2O00526 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK2O00526 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK2O00526 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK2O00526 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK2O00526 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
UPK2O00526 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.25■□□□□ 0.35
UPK2O00526 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UPK2O00526 AC010525.1-201ENST00000585559 441 ntBASIC17.25■□□□□ 0.35
UPK2O00526 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.25■□□□□ 0.35
UPK2O00526 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UPK2O00526 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UPK2O00526 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
UPK2O00526 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.25■□□□□ 0.35
UPK2O00526 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.25■□□□□ 0.35
UPK2O00526 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.24■□□□□ 0.35
UPK2O00526 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.24■□□□□ 0.35
UPK2O00526 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UPK2O00526 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UPK2O00526 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.24■□□□□ 0.35
UPK2O00526 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.24■□□□□ 0.35
UPK2O00526 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.24■□□□□ 0.35
UPK2O00526 AL356441.2-201ENST00000443009 864 ntBASIC17.24■□□□□ 0.35
UPK2O00526 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.24■□□□□ 0.35
UPK2O00526 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
UPK2O00526 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UPK2O00526 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.23■□□□□ 0.35
UPK2O00526 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
UPK2O00526 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.23■□□□□ 0.35
UPK2O00526 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
UPK2O00526 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.23■□□□□ 0.35
UPK2O00526 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 AC104564.3-201ENST00000582367 638 ntBASIC17.23■□□□□ 0.35
UPK2O00526 AL138724.1-201ENST00000606771 1088 ntBASIC17.23■□□□□ 0.35
UPK2O00526 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UPK2O00526 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UPK2O00526 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UPK2O00526 SYT6-210ENST00000641643 1587 ntBASIC17.23■□□□□ 0.35
UPK2O00526 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPK2O00526 OXCT2P1-201ENST00000447263 1535 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms