Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCRL2O00421 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCRL2O00421 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCRL2O00421 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCRL2O00421 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCRL2O00421 LINC01006-201ENST00000333319 2292 ntBASIC19.3■□□□□ 0.68
CCRL2O00421 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.29■□□□□ 0.68
CCRL2O00421 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.29■□□□□ 0.68
CCRL2O00421 DUX4L9-201ENST00000449051 1259 ntBASIC19.29■□□□□ 0.68
CCRL2O00421 CA15P2-201ENST00000611168 834 ntBASIC19.29■□□□□ 0.68
CCRL2O00421 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.29■□□□□ 0.68
CCRL2O00421 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCRL2O00421 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCRL2O00421 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCRL2O00421 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.29■□□□□ 0.68
CCRL2O00421 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.29■□□□□ 0.68
CCRL2O00421 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCRL2O00421 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.28■□□□□ 0.68
CCRL2O00421 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.28■□□□□ 0.68
CCRL2O00421 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.28■□□□□ 0.68
CCRL2O00421 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.28■□□□□ 0.68
CCRL2O00421 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.28■□□□□ 0.68
CCRL2O00421 AC129492.7-201ENST00000622992 756 ntBASIC19.28■□□□□ 0.68
CCRL2O00421 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCRL2O00421 AC007952.6-201ENST00000573168 2673 ntBASIC19.28■□□□□ 0.68
CCRL2O00421 AC003957.1-201ENST00000625108 2673 ntBASIC19.28■□□□□ 0.68
CCRL2O00421 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.28■□□□□ 0.68
CCRL2O00421 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCRL2O00421 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCRL2O00421 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCRL2O00421 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
CCRL2O00421 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 AC009086.3-201ENST00000623486 1008 ntBASIC19.27■□□□□ 0.68
CCRL2O00421 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCRL2O00421 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
CCRL2O00421 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCRL2O00421 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCRL2O00421 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCRL2O00421 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.26■□□□□ 0.67
CCRL2O00421 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCRL2O00421 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCRL2O00421 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCRL2O00421 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCRL2O00421 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCRL2O00421 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCRL2O00421 FP325331.1-202ENST00000623531 1380 ntBASIC19.26■□□□□ 0.67
CCRL2O00421 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCRL2O00421 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCRL2O00421 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCRL2O00421 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.26■□□□□ 0.67
CCRL2O00421 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCRL2O00421 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCRL2O00421 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCRL2O00421 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCRL2O00421 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCRL2O00421 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.24■□□□□ 0.67
CCRL2O00421 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCRL2O00421 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCRL2O00421 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.24■□□□□ 0.67
CCRL2O00421 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.24■□□□□ 0.67
CCRL2O00421 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCRL2O00421 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCRL2O00421 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.24■□□□□ 0.67
CCRL2O00421 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms