Protein–RNA interactions for Protein: A6NM43

CCT8L1P, Putative T-complex protein 1 subunit theta-like 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT8L1PA6NM43 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCT8L1PA6NM43 LINC01960-201ENST00000563759 1884 ntBASIC21.32■■□□□ 1
CCT8L1PA6NM43 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCT8L1PA6NM43 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.32■■□□□ 1
CCT8L1PA6NM43 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCT8L1PA6NM43 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCT8L1PA6NM43 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCT8L1PA6NM43 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCT8L1PA6NM43 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCT8L1PA6NM43 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.3■■□□□ 1
CCT8L1PA6NM43 DUX4L9-201ENST00000449051 1259 ntBASIC21.3■■□□□ 1
CCT8L1PA6NM43 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCT8L1PA6NM43 MIR6765-201ENST00000614092 87 ntBASIC21.3■■□□□ 1
CCT8L1PA6NM43 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CCT8L1PA6NM43 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCT8L1PA6NM43 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.29■■□□□ 1
CCT8L1PA6NM43 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CCT8L1PA6NM43 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.28■■□□□ 1
CCT8L1PA6NM43 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.28■■□□□ 1
CCT8L1PA6NM43 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCT8L1PA6NM43 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCT8L1PA6NM43 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCT8L1PA6NM43 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.28■■□□□ 1
CCT8L1PA6NM43 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CCT8L1PA6NM43 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCT8L1PA6NM43 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCT8L1PA6NM43 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
CCT8L1PA6NM43 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.27■■□□□ 1
CCT8L1PA6NM43 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 LONRF2P2-201ENST00000439212 571 ntBASIC21.27■■□□□ 1
CCT8L1PA6NM43 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCT8L1PA6NM43 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCT8L1PA6NM43 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCT8L1PA6NM43 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCT8L1PA6NM43 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CCT8L1PA6NM43 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.27■□□□□ 0.99
CCT8L1PA6NM43 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.26■□□□□ 0.99
CCT8L1PA6NM43 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.25■□□□□ 0.99
CCT8L1PA6NM43 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms