Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 AC009102.2-201ENST00000606772 1639 ntBASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 AL157384.1-201ENST00000445995 2473 ntBASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV27A0A0K0K1C4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBV27A0A0K0K1C4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRBV27A0A0K0K1C4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV27A0A0K0K1C4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV27A0A0K0K1C4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 OXCT2P1-201ENST00000447263 1535 ntBASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 C17orf82-201ENST00000623772 1530 ntBASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 AC021242.3-201ENST00000607598 1377 ntBASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRBV27A0A0K0K1C4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 AC103834.1-201ENST00000520383 144 ntBASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 AC103724.3-201ENST00000564481 992 ntBASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 AL499627.2-201ENST00000606283 725 ntBASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV27A0A0K0K1C4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 YBX1P4-201ENST00000392794 808 ntBASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 AC079089.2-201ENST00000531211 1277 ntBASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 AL121603.2-201ENST00000557373 2117 ntBASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV27A0A0K0K1C4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV27A0A0K0K1C4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms