Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC163A0A0D9SF12 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 CYP2T1P-201ENST00000432607 1285 ntBASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 AC079089.2-201ENST00000531211 1277 ntBASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CCDC163A0A0D9SF12 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 PRORSD1P-201ENST00000295112 541 ntBASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 DUSP8P5-201ENST00000422884 1815 ntBASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC163A0A0D9SF12 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 AC008694.1-202ENST00000636953 945 ntBASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 AP006294.2-201ENST00000641667 209 ntBASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC163A0A0D9SF12 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 EEF1DP3-203ENST00000566025 782 ntBASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 AC069236.1-201ENST00000604339 616 ntBASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC163A0A0D9SF12 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 AL034346.1-201ENST00000568244 1277 ntBASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 AC053503.5-201ENST00000601508 636 ntBASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC163A0A0D9SF12 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC163A0A0D9SF12 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 AP004607.7-201ENST00000527152 1677 ntBASIC21.44■■□□□ 1.02
CCDC163A0A0D9SF12 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms