Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV17A0A0B4J275 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 DUX4L16-201ENST00000555130 1264 ntBASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV17A0A0B4J275 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV17A0A0B4J275 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TRAV17A0A0B4J275 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV17A0A0B4J275 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV17A0A0B4J275 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV17A0A0B4J275 KRT18P20-201ENST00000548986 1279 ntBASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 AC138907.5-202ENST00000569484 235 ntBASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 AL121832.2-201ENST00000610979 668 ntBASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
TRAV17A0A0B4J275 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 AC010141.2-201ENST00000452426 721 ntBASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV17A0A0B4J275 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 AC005181.1-201ENST00000604782 1256 ntBASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV17A0A0B4J275 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV17A0A0B4J275 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV17A0A0B4J275 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV17A0A0B4J275 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV17A0A0B4J275 AC083906.2-201ENST00000511578 360 ntBASIC19.54■□□□□ 0.72
TRAV17A0A0B4J275 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV17A0A0B4J275 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV17A0A0B4J275 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 LINC00526-201ENST00000581067 1875 ntBASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 AL050303.2-201ENST00000619798 666 ntBASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV17A0A0B4J275 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.52■□□□□ 0.71
TRAV17A0A0B4J275 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV17A0A0B4J275 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAV17A0A0B4J275 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms