Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 AL137060.1-201ENST00000618151 2648 ntBASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 AC034268.1-201ENST00000441047 882 ntBASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 AL354811.1-201ENST00000610286 706 ntBASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.31■□□□□ 0.84
PCDHGB6Q9Y5F9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PCDHGB6Q9Y5F9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB6Q9Y5F9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB6Q9Y5F9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 AC012414.1-201ENST00000556676 535 ntBASIC20.27■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGB6Q9Y5F9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PCDHGB6Q9Y5F9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB6Q9Y5F9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGB6Q9Y5F9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDHGB6Q9Y5F9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB6Q9Y5F9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB6Q9Y5F9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB6Q9Y5F9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms