Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 AC137767.1-201ENST00000602918 1920 ntBASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHB1Q9Y5F3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 AC139530.1-201ENST00000575312 1977 ntBASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 AC027612.3-201ENST00000413684 1047 ntBASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB1Q9Y5F3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 AL358852.1-201ENST00000623174 1268 ntBASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB1Q9Y5F3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 AC092053.2-201ENST00000640557 1818 ntBASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 AC087239.1-201ENST00000622671 572 ntBASIC21.58■■□□□ 1.05
PCDHB1Q9Y5F3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHB1Q9Y5F3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB1Q9Y5F3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 AC123595.1-201ENST00000440769 1046 ntBASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 IGHV3-19-201ENST00000521488 291 ntBASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB1Q9Y5F3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 EP400NL-214ENST00000641289 2402 ntBASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 AC012414.1-201ENST00000556676 535 ntBASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB1Q9Y5F3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms