Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COMMD3Q9UBI1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 LONRF2P2-201ENST00000439212 571 ntBASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COMMD3Q9UBI1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
COMMD3Q9UBI1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3Q9UBI1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 AC007952.6-201ENST00000573168 2673 ntBASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 AC003957.1-201ENST00000625108 2673 ntBASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.92■□□□□ 0.62
COMMD3Q9UBI1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 MIR6765-201ENST00000614092 87 ntBASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3Q9UBI1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms