Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD8Q9HCK8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 AC005224.4-201ENST00000583262 1652 ntBASIC20.48■□□□□ 0.87
CHD8Q9HCK8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD8Q9HCK8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD8Q9HCK8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 MIR6089-201ENST00000616698 64 ntBASIC20.46■□□□□ 0.87
CHD8Q9HCK8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 AC133561.5-201ENST00000635547 218 ntBASIC20.46■□□□□ 0.87
CHD8Q9HCK8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 LINC01529-204ENST00000636474 1715 ntBASIC20.46■□□□□ 0.87
CHD8Q9HCK8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD8Q9HCK8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD8Q9HCK8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD8Q9HCK8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 AC010141.2-201ENST00000452426 721 ntBASIC20.43■□□□□ 0.86
CHD8Q9HCK8 C1QBPP2-201ENST00000528754 825 ntBASIC20.43■□□□□ 0.86
CHD8Q9HCK8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHD8Q9HCK8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 FAM197Y4-202ENST00000622692 608 ntBASIC20.42■□□□□ 0.86
CHD8Q9HCK8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CHD8Q9HCK8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD8Q9HCK8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms